Researcher-facing

Resources

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Projects

Project Title	Project Institution	Project Owner	Tags	Status
Deep convolutional neural networks (dCNN) for image segmentation, instance labeling, and tracking.	University of Delaware	Anita Schwartz	bash, bioinformatics, computational-chemistry, debugging, domain-specific, hpc, machine-learning, programming, programming-languages-and-software-support, python, Researcher-facing, scripting, slurm, software-installation, tensorflow, visualization	In Progress
Physical chemistry studies of environmental pollutant transformations: SIMION modeling of ion behavior in an electric field	New Jersey Institute of Technology	Galen Collier	Researcher-facing, domain-specific, computational-chemistry, particle-physics, scripting, programming	Recruiting
Physical chemistry studies of environmental pollutant transformations: mass spectra analysis	New Jersey Institute of Technology	Galen Collier	Researcher-facing, domain-specific, computational-chemistry, particle-physics, scripting, programming, matlab	Recruiting
Physical chemistry studies of environmental pollutant transformations: LabVIEW codes for electrostatic collection and analysis of aerosol nanoparticles	New Jersey Institute of Technology	Galen Collier	Researcher-facing, domain-specific, computational-chemistry, particle-physics, scripting, programming	Recruiting
Physical chemistry studies of environmental pollutant transformations: MATLAB codes for morphological analysis of fractal soot aggregates	New Jersey Institute of Technology	Galen Collier	Researcher-facing, domain-specific, computational-chemistry, particle-physics, scripting, programming, matlab	Recruiting
Parallel analysis of variants in multiple bear genomes: algorithmic solutions	Rutgers University–Camden	Galen Collier	Researcher-facing, domain-specific, bioinformatics, Data-Facing	In Progress
Analyzing NJ COVID-19 responses with Control theory, extending a study from earlier this year.	Rutgers-Camden	Sean McQuade	Data-facing, matlab, programming, programming-best-practices, programming-languages-and-software-support, Researcher-facing, simulations, tools-and-techniques	In Progress
Electrostatics of the GABA(A) receptor pore	Rutgers University–Camden	Galen Collier	bash, domain-specific, molecular-dynamics, namd, programming, programming-best-practices, programming-languages-and-software-support, Researcher-facing, scripting, slurm	In Progress
Amsterdam Modeling Suite Software Usage on Penn State’s Roar Computer Clusters	Penn State University - Altoona Campus	Jeffrey Nucciarone	account, batch-jobs, cluster-support, computational-chemistry, cyberinfrastructure, domain-specific, file-transfer, hpc, hpc-getting-started, hpc-operations, hw-and-sw-integration, job-sizing, Management/Professional Development, pbs, permissions, provisioning, putty, quantum-mechanics, Researcher-facing, scheduler, scheduling, ssh, Systems-facing, technical-training-for-hpc, terminal-emulation-and-window-management, tools-and-techniques, Unclassified	In Progress
Project WiCCED ML	University of Delaware	Anita Schwartz	Researcher-facing, domain-specific, machine-learning, docker, programming-languages-and-software-support, programming-best-practices, python, r, software-installation, tensorflow, tuning, spark, kubernetes, jupyterhub, hadoop	In Progress
Parallel analysis of variants in multiple bear genomes: Visualization of complexity	Rutgers University–Camden	Galen Collier	Researcher-facing, domain-specific, bioinformatics, visualization	In Progress

Student Facilitators

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Mentors and Regional Facilitators

Name	Region	Skills	Interests
Scott Valcourt	Northeast	account bash batch-jobs big-data compiling cyberinfrastructure data-handling data-lifecycle more...
Kaylea Nelson	CAREERS	astrophysics bash batch-jobs cluster-support compiling conda debugging environment-modules more...	acls astrophysics bash batch-jobs c++ compiling conda Data-facing more...
Galen Collier	CAREERS	cluster-support cyberinfrastructure Data-facing hpc professional-development Researcher-facing software-installation unix-environment
Anita Schwartz	CAREERS	bash batch-jobs cluster-support containers Data-facing data-management distributed-computing environment-modules more...
Vikram Gazula	Kentucky	containers cyberinfrastructure distributed-computing hpc Researcher-facing science gateway
Thomas Cheatham	RMACC	community-outreach computational-chemistry gpus Management/Professional Development molecular-dynamics proposal-development Researcher-facing workforce-development	cyberinfrastructure Data-facing Management/Professional Development Researcher-facing Systems-facing
Chuck Pavloski	CAREERS	archiving cluster-support cyberinfrastructure Data-facing data-lifecycle data-management domain-specific file-system more...
Yongwook Song	Kentucky	azure big-data Data-facing deep-learning machine-learning Researcher-facing tensorflow video-processing more...
Gaurav Khanna	CAREERS, Northeast	astrophysics bash batch-jobs c++ cloud/vm cluster-support compiling cpus more...
James Deaton	Great Plains	archiving bash cgroups community-outreach conda containers cyberinfrastructure data-wrangling more...

Researchers and Educators

Name	Skills	Interests
Gaurav Khanna	astrophysics bash batch-jobs c++ cloud/vm cluster-support compiling cpus more...

Blog Entries

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