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HPC

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Projects
Project Title Project Institution Project Owner Tags Status
Deep convolutional neural networks (dCNN) for image segmentation, instance labeling, and tracking. University of Delaware Anita Schwartz Researcher-facing, Domain-Specific, bioinformatics, computational-chemistry, machine-learning, visualization, Programming-languages-and-software-support, scripting, programming, python, bash, HPC, slurm, Software-installation, tensorflow, debugging In Progress
End-to-end learning of protein-protein interactions Rutgers University–Camden Galen Collier Researcher-facing, Domain-Specific, bioinformatics, computational-chemistry, machine-learning, visualization, Programming-languages-and-software-support, programming-best-practices, scripting, programming, python, bash, HPC, slurm, Software-installation, tensorflow, tuning, debugging In Progress
Amsterdam Modeling Suite Software Usage on Penn State’s Roar Computer Clusters Penn State University - Altoona Campus Jeffrey Nucciarone Researcher-facing, Domain-Specific, computational-chemistry, quantum-mechanics, hpc-getting-started, Tools-and-Techniques, batch-jobs, job-sizing, scheduling, terminal-emulation-and-window-management, Systems-facing, HPC-Operations, accounts, provisioning, permissions, hw-and-sw-integration, HPC, scheduler, pbs, Cluster-support, file-transfer, putty, ssh, Management/Professional Development, Technical-Training-for-HPC, Unclassified, cyberinfrastructure, HPCs In Progress
An optimized search algorithm for gravitational waves from post-merger remnants University of Rhode Island Gaurav Khanna astrophysics, hpc-getting-started, parallelism, python, gpus, HPC, conda, cuda, parallelization In Progress
Mentors and Regional Facilitators
Name Region Skills Interests
Scott Valcourt Northeast
Galen Collier CAREERS
Vikram Gazula Kentucky
Bhushan Chitre Kentucky
Brett Milash RMACC
Anita Orendt RMACC
Brian Haymore RMACC
Kaylea Nelson CAREERS
Neil McGlohon CAREERS
Andrew Sherman CAREERS
Grant Scott Great Plains
Chuck Pavloski CAREERS
Jeffrey Nucciarone CAREERS
Ying Zhang CAREERS
Gaurav Khanna CAREERS, Northeast
Jacob Pessin Northeast
Juan Vanegas Northeast
Shawn Sivy CAREERS
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