| Title | Description | Category | Tags | Skill Level | Affinity Group |
|---|---|---|---|---|---|
| Introduction to Python for Digital Humanities and Computational Research | This documentation contains introductory material on Python Programming for Digital Humanities and… more | Documentation |
ai big-data data-analysis more | Beginner | |
| PyTorch for Deep Learning and Natural Language Processing | PyTorch is a Python library that supports accelerated GPU processing for Machine Learning and Deep… more | Documentation |
ai big-data data-analysis more | Beginner | |
| Paraview UArizona HPC links (advanced) | These links take you to visualization resources supported by the University of Arizona's HPC… more | Documentation |
Intermediate, Advanced | ||
| A survey on datasets for fairness-aware machine learning | The research paper provides an overview of various datasets that have been used to study fairness… more | Documentation |
ai data-analysis deep-learning more | Intermediate, Advanced, Expert | |
| ACCESS KB Guide - Anvil | Documentation |
Anvil | |||
| ACCESS KB Guide - DELTA | Documentation |
Delta | |||
| ACCESS KB Guide - DELTA | Documentation |
AI Institutes Cyberinfrastructure | |||
| ACCESS KB Guide - Expanse | Documentation |
composable-systems gpu | Expanse | ||
| ACCESS Pegasus Documentation | Documentation |
pegasus | Beginner, Intermediate, Advanced, Expert | Pegasus | |
| AHPCC documentary | This link is a documentary website to use AHPCC. | Documentation |
login batch-jobs slurm more | Beginner, Intermediate | |
| CUDA Toolkit Documentation | NVIDIA CUDA Toolkit Documentation: If you are working with GPUs in HPC, the NVIDIA CUDA Toolkit is… more | Documentation |
documentation c c++ more | Intermediate, Advanced | |
| DARWIN Documentation Pages | Documentation |
big-data | DARWIN | ||
| Fairness and Machine Learning | The "Fairness and Machine Learning" book offers a rigorous exploration of fairness in ML… more | Documentation |
ai data-analysis deep-learning more | Intermediate, Advanced, Expert | |
| GIS: Geocoding Services | Geocoding is the process of taking a street address and converting it into coordinates that can be… more | Documentation |
geographic-information-system | Beginner, Intermediate | |
| Info about retiring of R GIS packages rgdal, rgeos, maptools in 2023 | R GIS packages "rgdal", "rgeos", and "maptools" are package set to be… more | Documentation |
r | Beginner, Intermediate, Advanced, Expert | |
| Introductory Tutorial to Numpy and Pandas for Data Analysis | In this tutorial, I present an overview with many examples of the use of Numpy and Pandas for data… more | Documentation |
ai big-data data-analysis more | Beginner | |
| Jetstream2 Docs Site | Documentation |
jetstream | Beginner, Intermediate, Advanced, Expert | Jetstream-2 | |
| Paraview UArizona HPC links (beginner) | These links take you to visualization resources supported by the University of Arizona's HPC… more | Documentation |
Beginner | ||
| Probabilistic Semantic Data Association for Collaborative Human-Robot Sensing | Humans cannot always be treated as oracles for collaborative sensing. Robots thus need to maintain… more | Documentation |
ai machine-learning | Advanced, Expert | |
| QGIS Processing Executor | Running QGIS tools from the command line | Documentation |
geographic-information-system | Intermediate | |
| Rockfish at Johns Hopkins University | Resources and User Guide available at Rockfish | Documentation |
rockfish | Intermediate | |
| Vulkan Support Survey across Systems | It's not uncommon to see beautiful visualizations in HPC center galleries, but the majority of… more | Documentation |
anvil bridges-2 darwin more | Beginner, Intermediate | |
| What is fairness in ML? | This article discusses the importance of fairness in machine learning and provides insights into… more | Documentation |
ai visualization data-analysis more | Intermediate | |
| Cornell Virtual Workshop | Comprehensive training resource for high performance computing topics. Current tags are just a… more | Learning |
performance-tuning python more | Beginner, Intermediate, Advanced, Expert | |
| HPC University | A comprehensive list of training resources. The tag list does not represent the full extent of… more | Learning |
python r more | Beginner, Intermediate, Advanced, Expert | |
| Using Linux commands in a python script (and the difference between the subprocess and os python modules) | Learn how to use Linux commands in a python script. Specifically, learn how to use the subprocess… more | Learning |
programming python | Beginner, Intermediate | |
| Version control with Git | Understand the benefits of an automated version control system and the basics of how automated… more | Learning |
version-control github git | Beginner | |
| ACCESS Campus Champion Example Allocation | ACCESS requests proposals to be written following NSF proposal guidelines. The link provides an… more | Learning |
allocations-proposal proposal-request research-facilitation | Beginner | |
| ACCESS HPC Workshop Series | Monthly workshops sponsored by ACCESS on a variety of HPC topics organized by Pittsburgh… more | Learning |
big-data deep-learning machine-learning more | Beginner, Intermediate | AI Institutes Cyberinfrastructure |
| Active inference textbook | This textbook is the first comprehensive treatment of active inference, an integrative perspective… more | Learning |
ai machine-learning neural-networks | Beginner, Intermediate, Advanced | |
| Applications of Machine Learning in Engineering and Parameter Tuning Tutorial | Slides for a tutorial on Machine Learning applications in Engineering and parameter tuning given at… more | Learning |
data-analysis machine-learning python | Beginner, Intermediate | |
| Automated Machine Learning Book | The authoritative book on automated machine learning, which allows practitioners without ML… more | Learning |
ai data-analysis deep-learning more | Intermediate, Advanced, Expert | |
| Bash shell tutorial | Training materials for using the bash (and zsh) shell. | Learning |
bash | Intermediate | |
| CHARMM Links to Install, Run, and Troubleshoot MD Simulations | CHARMM (Chemistry at HARvard Macromolecular Mechanics) is a widely distributed molecular simulation… more | Learning |
charmm molecular-dynamics namd more | Beginner, Intermediate | |
| Examples of code using JSON nlohmann header only Library for C++ | This code showcases how to work with the header-only nlohmann JSON library for C++. In order to… more | Learning |
c++ | Advanced | |
| Examples of Thrust code for GPU Parallelization | Some examples for writing Thrust code. To compile, download the CUDA compiler from NVIDIA. This… more | Learning |
parallelization gpu cuda | Intermediate, Advanced, Expert | |
| File management of Visual Studio Code on clusters | Visual Studio Code, commonly known as VSCode, is a popular tool used by programmers worldwide. It… more | Learning |
faster file-limit SCRATCH more | Intermediate | |
| Framework to help in scaling Machine Learning/Deep Learning/AI/NLP Models to Web Application level | This framework will help in scaling Machine Learning/Deep Learning/Artificial Intelligence/Natural… more | Learning |
ai deep-learning machine-learning more | Intermediate | |
| FreeSurfer Tutorials | The official MGH / Harvard tutorial page for FreeSurfer. The FreeSurfer group has provided and… more | Learning |
data-analysis image-processing psychology | Beginner, Intermediate | |
| FSL Lectures | This is the official University of Oxford FSL group lecture page. This includes information on… more | Learning |
data-analysis image-processing psychology | Beginner, Intermediate, Advanced | |
| GDAL Multi-threading | Multi-threading guidance when using GDAL. | Learning |
parallelization geographic-information-system | Intermediate | |
| Geocomputation with R (Free Reference Book) | Below is a link for a book that focuses on how to use "sf" and "terra" packages… more | Learning |
r | Beginner, Intermediate | |
| GIS: Projections and their distortions | In GIS, projections are helpful to take something plotted on a globe and convert it to a flat map… more | Learning |
geographic-information-system | Beginner, Intermediate | |
| GIS: What is a Geodetic Datums? | Often when working with GIS, or spatial data, one encounters the word "datum" and it may… more | Learning |
FIELD of SCIENCE | Beginner | |
| Git Branching Workflow and Maneuvers | A couple of resources that: 1.) Presents and defends a git branching workflow for… more |
Learning |
github git | Beginner, Intermediate, Advanced | |
| GPU Computing Workshop Series for the Earth Science Community | GPU training series for scientists, software engineers, and students, with emphasis on Earth… more | Learning |
optimization performance-tuning profiling more | Beginner | |
| Harnessing the Power of Cloud and Machine Learning for Climate and Ocean Advances | Documentation and presentation on how to use machine learning and deep learning framework using… more | Learning |
CLOUD machine-learning | Intermediate | |
| Header-only C++ JSON library | JSON is a lightweight format for storing and transporting data, for example in a config file. This… more | Learning |
resources c++ | Intermediate, Advanced | |
| Hour of Ci | Hour of Cyberinfrastructure (Hour of CI) is a nationwide campaign to introduce undergraduate and… more | Learning |
arcgis | Beginner | ArcGIS Users |
| How to use Rclone | Learn how to use Rclone to transfer data, specifically from your local drive to the Open Storage… more | Learning |
data-transfer | Beginner | |
| Introduction to Parallel Computing Tutorial | The tutorial is intended to provide a brief overview of the extensive and broad topic of Parallel… more | Learning |
Beginner | ||
| Language models and using HPC resources | Documentation and research based on the latest NLP text generation detection methods for 2023. | Learning |
ACCESS RPs | Intermediate | |
| Linux Tutorial from Ryan's Tutorials | The following pages are intended to give you a solid foundation in how to use the terminal, to get… more | Learning |
file-systems bash unix-environment | Beginner | |
| Machine Learning in R online book | The free online book for the mlr3 machine learning framework for R. Gives a comprehensive overview… more | Learning |
data-analysis machine-learning r | Beginner, Intermediate, Advanced, Expert | |
| Molecular Dynamics Tutorials for Beginner's | Links to MD tutorials for beginner's across various simulation platforms. | Learning |
cloud-computing amber charmm more | Beginner | |
| MPI Resources | Workshop for beginners and intermediate students in MPI which includes helpful exercises. Open MPI… more | Learning |
parallelization mpi | Beginner, Intermediate | |
| NCSA HPC Training Moodle | Self-paced tutorials on high-end computing topics such as parallel computing, multi-core… more | Learning |
performance-tuning profiling parallelization more | Beginner, Intermediate | |
| NERSC Training and Tutorials | A comprehensive collection of NERSC developed training and tutorial events, offered on regular… more | Learning |
PROFESSIONAL and WORKFORCE DEVELOPMENT technical-training-for-hpc training | Beginner, Intermediate, Advanced, Expert | |
| Oakridge Leadership Computing Facility (OLCF) Training Events and Archive | Upcoming training events and archives of training materials detailing general HPC best practices as… more | Learning |
PROFESSIONAL and WORKFORCE DEVELOPMENT technical-training-for-hpc training | Beginner, Intermediate, Advanced, Expert | |
| Python | Python course offered by Texas A&M HPRC | Learning |
python | Beginner | |
| Setting up PyFR flow solver on clusters | These instructions were executed on the FASTER and Grace cluster computing facilities at Texas A… more | Learning |
faster computational-fluid-dynamics c++ more | Advanced | |
| Slurm Tutorials | Introduction to the Slurm Workload Manager for users and system administrators, plus some material… more | Learning |
administering-hpc cluster-management hpc-cluster-architecture more | Beginner | |
| Texas A&M HPRC Training Site | Training Resources and Courses offered by Texas A&M's Research Computing Group | Learning |
Beginner, Intermediate, Advanced, Expert | ||
| Thrust resources | Thrust is a CUDA library that optimizes parallelization on the GPU for you. The Thrust tutorial is… more | Learning |
resources more | Intermediate, Advanced, Expert | |
| UNIX/command line basics tutorial | Introductory training materials for working on the UNIX command line. | Learning |
bash | Beginner | |
| Using Dask on HPC Systems | A tutorial on the effective use of Dask on HPC resources. The four-hour tutorial will be split into… more | Learning |
PROFESSIONAL and WORKFORCE DEVELOPMENT technical-training-for-hpc jupyterhub more | Beginner, Intermediate | |
| Why 'N How: Martinos Center for Biomedical Imaging: | The Why & How seminar series is designed to introduce research assistants, graduate students,… more | Learning |
image-processing | Beginner, Intermediate, Advanced | |
| Wiki for Onboarding onto the C3DDB Cluster at MGHPCC | This is a resource for researchers and students looking to on-board onto the c3ddb cluster at… more | Learning |
Beginner | ||
| Slurm User Group Mailing List | Mailing List |
schedulers slurm | |||
| UCLA Extended Reality (XR) collaboration resources and Workshop | Comprehensive Extended Reality (XR) collaboration resources for building a high performance… more | Presentation |
documentation setup neural-networks | Beginner, Intermediate, Advanced, Expert | |
| Benchmarking with a cross-platform open-source flow solver, PyFR | What is PyFR and how does it solve fluid flow problems? PyFR is an open-source Computational… more |
Tool |
finite-element-analysis benchmarking parallelization more | Intermediate | |
| Higher Ed Controlled Unclassified Information Slack (HigherEdCUI) | Slack channel for the Higher Ed CUI community | Tool |
cybersecurity | Cybersecurity for Research Computing | |
| MDAnalysis - Python library for the analysis of molecular dynamics simulations | MDAnalysis is a python based library of tools for the analysis of molecular dynamics simulations.… more | Tool |
computational-chemistry materials-science python | Beginner, Intermediate, Advanced, Expert | |
| OpenMP and Multithreaded Jobs in GRASS | Techniques and support for multithreaded geospatial data processing in GRASS. | Tool |
parallelization geographic-information-system openmp | Intermediate | |
| Quick and Robust Data Augmentation with Albumentations Library | Data augmentation is a crucial step in the pipeline for image classification with deep learning.… more | Tool |
deep-learning python | Advanced, Expert | |
| DELTA Introductory Video | Introductory video about DELTA. Speaker Tim Boerner, Senior Assistant Director, NCSA | video |
gpu training | Delta | |
| Data Analysis with R for Educators | This webinar series is an orientation to R. We start with an overview of R’s history and place in… more | Video Link |
data-analysis data-science psychology more | Beginner | |
| Displaying Scientific Data with Tableau | Tableau is a popular and capable software product for creating charts that present data and… more | Video Link |
big-data data-analysis technical-training-for-hpc more | Intermediate | |
| Python Tools for Data Science | Python has become a very popular programming language and software ecosystem for work in Data… more | Video Link |
ai big-data data-analysis more | Intermediate | |
| WRF in the Public Cloud | CAC summer student employee Jeff Lantz describes his experiences in running the WRF weather… more | Video Link |
aws azure cloud-commercial more | Advanced | |
| HPC Carpentry | An HPC focused Carpentry community. Trainings include: HPC fundamentals, python, chapel, LAMMPS,… more | Website |
software-carpentry training | Beginner, Intermediate, Advanced, Expert | |
| Open OnDemand | Open OnDemand home page. https://openondemand.org | Website |
more | Beginner, Intermediate, Advanced, Expert | Open Ondemand |
| Open OnDemand | Open OnDemand home page. https://openondemand.org | Website |
more | Beginner, Intermediate, Advanced, Expert | AI Institutes Cyberinfrastructure |
| The Carpentries | We teach foundational coding and data science skills to researchers worldwide. | Website |
training | Beginner, Intermediate, Advanced, Expert | |
| Neurostars | A question and answer forum for neuroscience researchers, infrastructure providers and software… more | Website |
documentation image-processing data-sharing more | Beginner, Intermediate, Advanced, Expert | |
| ACCESS Support Portal | Website |
ACCESS Support | |||
| ACCESS Support Portal | Website |
AI Institutes Cyberinfrastructure | |||
| Anvil Home Page | Website |
Anvil | |||
| Ask.CI Q&A Platform for Research Computing | Website |
Beginner, Intermediate, Advanced, Expert | Ask.CI Moderators | ||
| Better Scientific Software (BSSw) | The Better Scientific Software (BSSw) project provides a community to collaborate and learn about… more | Website |
PROFESSIONAL and WORKFORCE DEVELOPMENT community-outreach project-management more | Beginner, Intermediate, Advanced, Expert | |
| Bridges-2 Home Page | Landing Page for Bridges-2 information | Website |
Bridges-2 | ||
| Campus Champions Home Page | Website |
community-outreach professional-development | Beginner, Intermediate, Advanced, Expert | Campus Champions | |
| CaRCC Data Facing Track | The Data-Facing Track of the People Network brings together people from research computing groups,… more | Website |
data-access-protocols data-analysis data-compliance | Beginner, Intermediate, Advanced, Expert | Large Data Sets |
| ConnectCI | Connect.Cybinfrastructure is a family of portals, each representing a program that is serving a… more | Website |
Beginner, Intermediate, Advanced, Expert | Connect CI Alliance | |
| Educause HEISC-800-171 Community Group | The purpose of this group is to provide a forum to discuss NIST 800-171 compliance. Participants… more | Website |
cybersecurity | Cybersecurity for Research Computing | |
| Expanse Home Page | Website |
big-data | Expanse | ||
| HPCwire | HPCwire is a prominent news and information source for the HPC community. Their website offers… more | Website |
documentation bioinformatics pytorch more | Beginner, Intermediate, Advanced, Expert | |
| Jetstream Home | Website |
Jetstream-2 | |||
| Jetstream Home | Website |
AI Institutes Cyberinfrastructure | |||
| Jetstream2 Status | Website |
jetstream | Beginner, Intermediate, Advanced, Expert | Jetstream-2 | |
| Neurodesk | Neurodesk provides a containerised data analysis environment to facilitate reproducible analysis of… more | Website |
psychology containers software-installation more | Beginner, Intermediate, Advanced | |
| NITRC | The Neuroimaging Tools and Resources Collaboratory (NITRC) is a neuroimaging informatics knowledge… more | Website |
data-analysis image-processing data-sharing | Beginner, Intermediate, Advanced, Expert | |
| Open Storage Network | The Open Storage Network, a national resource available through the XSEDE resource allocation… more | Website |
data-management data-retention more | Beginner, Intermediate, Advanced, Expert | Large Data Sets |
| Open Storage Network | The Open Storage Network, a national resource available through the XSEDE resource allocation… more | Website |
data-management data-retention more | Beginner, Intermediate, Advanced, Expert | Open Storage Network |
| Recommended Libraries for Cyberinfrastructure Users Developing Jupyter Notebooks | This repository contains information about Jupyter Widgets and how they can be used to develop… more | Website |
ANALYSES and ALGORITHMS ai big-data more | Beginner, Intermediate, Advanced, Expert | |
| Regulated Research Community of Practice | The daily news clearly shows the increasing threat to safety and privacy of data, personal as well… more | Website |
community-outreach cybersecurity | Beginner, Intermediate, Advanced, Expert | Cybersecurity for Research Computing |
| Research Security Operations Center at IU | The NSF-funded ResearchSOC helps make scientific computing resilient to cyberattacks and capable of… more | Website |
cybersecurity | Cybersecurity for Research Computing | |
| Resource to active inference | Active inference is an emerging study field in machine learning and computational neuroscience.… more | Website |
ai | Beginner, Intermediate, Advanced | |
| RMACC Website | Rocky Mountain Advanced Computing Consortium Website | Website |
community-outreach | RMACC/Campus Champions Region 8 | |
| RRCoP Resources Page | Very helpful list of Regulated Research Community of Practice's collaborating communities. | Website |
community-outreach cybersecurity | Beginner, Intermediate, Advanced, Expert | Cybersecurity for Research Computing |
| Slurm Scheduling Software Documentation | Slurm is an open source, fault-tolerant, and highly scalable cluster management and job scheduling… more | Website |
slurm cluster-support | Intermediate, Advanced | |
| Trusted CI | The mission of Trusted CI is to lead in the development of an NSF Cybersecurity Ecosystem with the… more | Website |
cybersecurity training | Beginner, Intermediate, Advanced, Expert | Cybersecurity for Research Computing |
| Trusted CI Resources Page | Very helpful list of external resources from Trusted CI | Website |
cybersecurity | Cybersecurity for Research Computing | |
| Women in HPC | Website |
community-outreach | Beginner |