python

Mentors and Regional Facilitators

Name	Region	Skills	Interests
Ami Gaspar	Campus Champions, Northeast	archiving backup cloud-computing community-outreach data-access-protocols data-compliance data-lifecycle data-management more...
Adrian Del Maestro	Northeast	batch-jobs c++ compiling data-management debugging gpu julia jupyterhub more...
Aaron Jezghani	Campus Champions	administering-hpc anaconda bash batch-jobs benchmarking c c++ checkpoint more...
Andrew Pasquale	ACCESS CSSN, At-Large, Campus Champions	ACCESS-website git opencv python sql
Bala Desinghu	CAREERS	ai big-data community-outreach computational-chemistry data-analysis dft image-processing machine-learning more...
Brian Gregor	Northeast, Campus Champions	big-data debugging gpu hardware job-sizing machine-learning matlab mpi more...
Michael Blackmon	Campus Champions	administering-hpc anaconda bash batch-jobs c c++ cgroups cluster-support more...
Brett Milash	RMACC	bioinformatics python
Kevin Bryan	Campus Champions	acls bash c c++ cluster-management compiling conda debugging more...	archiving data-transfer deep-learning professional-development
Benjamin Meyers	Campus Champions	bash batch-jobs cybersecurity data-science dependencies git machine-learning natural-language-processing more...	administering-hpc bash batch-jobs conda cybersecurity data-analysis data-science dependencies more...
Carrie Brown	Great Plains	bash batch-jobs conda containers data-wrangling distributed-computing fastx python more...
Carrie Brown	CAREERS, ACCESS CSSN	bioinformatics cleanup community-outreach data-wrangling distributed-computing genomics github github-pages more...
Christina Divoll	Campus Champions, ACCESS CSSN	acls ADMIN and SUPPORT administering-hpc bash cluster-support DATA STORAGE MGMT and MVMT data-lifecycle data-management more...	CLOUD
Christopher Bl…	Campus Champions	anaconda aws azure bash benchmarking c c++ cloud-commercial more...
Cody Stevens	Campus Champions	administering-hpc anaconda archiving aws backup bash batch-jobs benchmarking more...
Cesar Sul	ACCESS CSSN, Campus Champions	astrophysics bash batch-jobs c git job-array job-submission lmod more...	anaconda astrophysics bash batch-jobs benchmarking c checkpoint containers more...
David Oury	Northeast	programming programming-best-practices python r tensorflow unix-environment
Balamurugan Desinghu	ACCESS CSSN, Campus Champions, CAREERS, Northeast	ai anaconda api bash batch-jobs benchmarking big-data bioinformatics more...	affinity-group ai allocations-proposal amber anaconda archiving backup bash more...
Davide Del Vento		c python quantum-computing	conda containers hpc-storage jupyterhub quantum-computing scheduling spack
Daniel Howard	RMACC, Campus Champions, ACCESS CSSN	ai bash c c++ computational-fluid-dynamics conda cuda data-provenance more...
Darshan Sarojini	ACCESS CSSN, Campus Champions	community-outreach computational-fluid-dynamics comsol mathematica matlab optimization paraview python more...	anaconda computational-fluid-dynamics comsol finite-element-analysis linear-programming monte-carlo optimization parameter-sweeps more...
Elie Alhajjar	ACCESS CSSN	biology c++ community-outreach data-science julia mathematica matlab professional-development more...	ai big-data biology c++ community-outreach data-analysis data-science deep-learning more...
Edwin Posada	Campus Champions	administering-hpc bash batch-jobs benchmarking c c++ cluster-management cluster-support more...
Eden Furtak-Cole	Campus Champions	bash c c++ compiling computational-fluid-dynamics finite-element-analysis git julia more...	bash c c++ data-analysis expanse git julia modules more...
Fernando Garzon	ACCESS CSSN	abstract ai aws bash batch-jobs big-data citation containers more...	ai aws azure bash batch-jobs big-data c c++ more...
George Young	CAREERS	ai conda machine-learning matlab project-management python	julia machine-learning matlab python r
Craig Gross	Campus Champions	bash c c++ conda data-analysis data-science git github more...
Ibrahim Sheikh	CAREERS	benchmarking community-outreach debugging deep-learning dependencies encryption geographic-information-system git more...	backup benchmarking community-outreach computational-chemistry deep-learning file-formats gamess geographic-information-system more...
Iman Rahbari	Campus Champions, ACCESS CSSN	bash computational-fluid-dynamics comsol data-analysis fortran machine-learning matlab modules more...	abaqus ai anvil aws bash batch-jobs bridges-2 computational-fluid-dynamics more...
Yu-Chieh Chi	Campus Champions	anaconda bash batch-jobs c c++ computational-chemistry containers cuda more...
James Deaton	Campus Champions, Great Plains, ACCESS CSSN	archiving bash cgroups community-outreach conda containers data-wrangling hpc-storage more...
Jordan Hayes	Campus Champions	acls administering-hpc amber anaconda api atlas aws bash more...
Jacob Pessin	Northeast	aws bash batch-jobs big-data bioinformatics cloud-storage cluster-support cyverse more...
Jason Wells	Campus Champions	administering-hpc api bash batch-jobs biology cluster-management cluster-support computational-fluid-dynamics more...
John Goodhue	CAREERS, Northeast	programming python sciencedmz storage
Juan Vanegas	Northeast	bash batch-jobs bioinformatics compiling conda environment-modules hpc-cluster-build hpc-operations more...
Jeffrey Weekley	Campus Champions	administering-hpc archiving biology community-outreach condo containers cybersecurity data-compliance more...
Jason Yalim	Campus Champions	administering-hpc bash benchmarking c c++ computational-fluid-dynamics cpu-bound data-analysis more...
Jacob Fosso Tande	Campus Champions	administering-hpc azure bash c++ cluster-support community-outreach compiling computational-chemistry more...
Kali McLennan	Campus Champions, Great Plains	acls bash cgroups cifs cluster-management cluster-support compiling conda more...
Keri Toksu	Northeast, Campus Champions	bash batch-jobs natural-language-processing programming python resources scheduling slurm more...
Katherine Nelson	Campus Champions, CAREERS, ACCESS CSSN	astrophysics bash batch-jobs cluster-support compiling conda debugging environment-modules more...	acls astrophysics bash batch-jobs c++ compiling conda debugging more...
Kenneth Bundy	CAREERS	anaconda aws azure bash batch-jobs c c++ cloud-commercial more...
Lakitha Wijeratne	TRECIS	image-processing machine-learning matlab python slurm	c++ image-processing machine-learning matlab neural-networks python slurm
Thomas Langford	Campus Champions, CAREERS	big-data containers monte-carlo mpi parallelization particle-physics python quantum-mechanics more...
Lauren Hill-Beaton	CAREERS	anaconda arcgis conda geographic-information-system netcdf ondemand pip programming more...	arcgis geographic-information-system python
shuai liu	ACCESS CSSN	ai anaconda azure big-data bioinformatics biology containers data-analysis more...
Martin Cuma	RMACC	bash batch-jobs c++ compiling debugging distributed-computing environment-modules job-sizing more...	bash batch-jobs c++ compiling comsol conda containers cuda more...
Michael Kyle	Campus Champions	bash cybersecurity python research-facilitation sql	anaconda arcgis bash community-outreach conda cybersecurity data-analysis data-lifecycle more...
Michael Puerrer	Campus Champions, Northeast	astrophysics bash benchmarking c c++ conda containers cuda more...
Maryam Taeb		abstract ai anaconda bash big-data community-outreach conda cybersecurity more...	abstract ai anaconda api bash big-data c citation more...
Nicholas Danes	Campus Champions, MINES	anaconda biology compiling computational-fluid-dynamics cpu-bound distributed-computing fortran job-array more...	ai aws azure benchmarking big-data c c++ deep-learning more...
Nick Dusek	Campus Champions	administering-hpc anaconda bash batch-jobs bioinformatics compiling containers data-transfer more...
Justin Oelgoetz	Campus Champions	abstract affiliations astrophysics bash benchmarking c c++ citation more...	administering-hpc ai amber astrophysics benchmarking c c++ charmm more...
Nicholas Panchy	Campus Champions	bash bioinformatics biology conda easybuild genomics modules ondemand more...
Mahmoud Parvizi	Campus Champions	astrophysics big-data cloud-computing data-analysis data-science machine-learning particle-physics python more...	deep-learning management neural-networks professional-development training
Mark Perri	Campus Champions	computational-chemistry docker gamess jetstream namd openstack programming python more...	computational-chemistry docker gamess jupyterhub molecular-dynamics namd python quantum-mechanics
Paul Rulis	Campus Champions	abstract affiliations ai bash batch-jobs c c++ checkpoint more...	abstract affiliations ai amber atlas bash batch-jobs benchmarking more...
Mike Renfro	Campus Champions	administering-hpc anaconda bash conda environment-modules fortran git github more...
Russell Hofmann	ACCESS CSSN	computational-chemistry data-analysis data-science dft gaussian genomics gromacs kubernetes more...	administering-hpc cluster-support computational-chemistry data-analysis data-science gaussian genomics gromacs more...
Rob Coyne	CAREERS	astrophysics python	astrophysics bash machine-learning mpi python scripting
Ron Rahaman	Campus Champions	anaconda bash batch-jobs benchmarking c c++ cluster-support compiling more...	containers cpu-architecture dependencies documentation gpu hpc-arch-and-perf programming-best-practices software-carpentry more...
Sean Anderson	Campus Champions	administering-hpc anaconda bash batch-jobs benchmarking cluster-support community-outreach compiling more...
Grant Scott	Great Plains	ai aws bash big-data c++ compiling containers cuda more...	management
Shawn Doughty	Campus Champions, Northeast	aws batch-jobs cgroups containers fastx file-systems globus gpu more...
Shane Sanders	Campus Champions	bioinformatics c c++ containers machine-learning programming python research-grants more...	archiving big-data data-analysis data-compliance data-lifecycle data-management data-reproducibility data-retention more...
Xiaoqin Huang	ACCESS CSSN	access-acount ACCESS-credits adding-users affinity-group allocations-extension allocations-proposal amber anaconda more...	ACCESS-credits ACCESS-website adding-users affinity-group allocations-extension allocations-proposal amber anaconda more...
Simon Delattre		anaconda bash big-data conda data-transfer data-wrangling deep-learning machine-learning more...	bioinformatics
Suhong Li	CAREERS, ACCESS CSSN	anaconda big-data cleanup data-analysis data-wrangling github machine-learning natural-language-processing more...
Soham Pal	Campus Champions	bash c++ conda file-formats git github github-pages jupyterhub more...
Spencer Pruitt	Northeast	batch-jobs computational-chemistry debugging distributed-computing hardware hpc-operations hpc-storage mpi more...
Sumit Saluja	Campus Champions	administering-hpc anaconda aws azure backup batch-jobs c c++ more...
Swabir Silayi	Campus Champions	amber anaconda bash batch-jobs benchmarking c c++ checkpoint more...	administering-hpc cluster-management
Shawn Sivy	Campus Champions, CAREERS	acls backup bash batch-jobs cifs compiling containers cuda more...
Steve Spicklemire	Campus Champions	c python react	aws big-data computational-chemistry cybersecurity data-analysis gce image-processing machine-learning more...
Tyler Burkett	Kentucky	aws bash c c++ containers cuda git github more...	networking quantum-mechanics
Timothy Middelkoop	Campus Champions, Great Plains, ACCESS CSSN	batch-jobs containers docker kubernetes python software-carpentry workforce-development
Wirawan Purwanto	Campus Champions, Northeast, ACCESS CSSN	bash batch-jobs c++ mpi python scripting	ai bash batch-jobs benchmarking big-data bioinformatics bridges-2 c more...
William Lai	ACCESS CSSN	administering-hpc ai anaconda archiving backup bash bioinformatics biology more...	administering-hpc ai archiving bash benchmarking big-data bioinformatics biology more...

Topics from Ask.CI

Affinity Groups

	Name	Description	Tags	Join
	AI Institutes Cyberinfrastructure	Gathering place for AI researchers to find curated information about using ACCESS resources for AI applications and research.	ai machine-learning gpu python	Login to join

Users

Name	Roles	Skills	Interests
Andrew Cheng	student facilitator	deep-learning image-processing programming python r slurm tensorflow
Alex Flosdorf	student facilitator	bash c++ programming programming-best-practices python
Aidan McCrillis	student facilitator	bioinformatics biology data-science python
Amogh Sarangdhar	student facilitator	anaconda c c++ data-science git github java python more...	ai data-science deep-learning linear-programming machine-learning
Anish Gaikwad	student facilitator	aws big-data data-analysis machine-learning opencv python pytorch scikit-learn more...
Andrew Pasquale	mentor	ACCESS-website git opencv python sql
Ahamed Arafaat…	student facilitator	ai anaconda aws bash big-data data-analysis data-management data-management-software more...
Arvind Sai Che…	student facilitator	data-analysis machine-learning python r	stata
Bala Desinghu	mentor researcher/educator	ai big-data community-outreach computational-chemistry data-analysis dft image-processing machine-learning more...
Bill Ni	student facilitator	aws c++ linear-programming pip programming project-management python s3	ai astrophysics aws bash big-data bioinformatics c++ cybersecurity more...
Carrie Brown	mentor steering committee	bioinformatics cleanup community-outreach data-wrangling distributed-computing genomics github github-pages more...
Joseph Antonucci	student facilitator	ai c c++ cleanup compiling cuda deep-learning git more...	ai astrophysics c c++ compiling cuda cybersecurity deep-learning more...
Chitral Samala	student facilitator	biology community-outreach data-transfer jupyterhub management matlab netcdf programming more...	c c++ cybersecurity geographic-information-system java julia science gateway software-installation more...
Christopher Nadeau	student facilitator	astrophysics python quantum-mechanics scripting unix-environment
Carlos Paniagua	researcher/educator	cleanup data-analysis data-lifecycle data-wrangling file-formats git github image-processing more...
Balamurugan Desinghu	mentor rcf	ai anaconda api bash batch-jobs benchmarking big-data bioinformatics more...	affinity-group ai allocations-proposal amber anaconda archiving backup bash more...
Daniel Evans	researcher/educator	c c++ cleanup compiling file-formats git programming project-management more...
Denis Kornev	researcher/educator	ai anaconda big-data data-analysis deep-learning machine-learning neural-networks python more...	big-data data-analysis pip python r rstudio-server scikit-learn
cheng fang	student facilitator	ai anaconda batch-jobs conda data-analysis distributed-computing file-formats linear-programming more...
George Young	mentor	ai conda machine-learning matlab project-management python	julia machine-learning matlab python r
Girish Ganesan	student facilitator	ai c++ deep-learning machine-learning natural-language-processing neural-networks python pytorch	big-data deep-learning distributed-computing machine-learning natural-language-processing neural-networks quantum-mechanics
Gregory Ezike	student facilitator	bash biology c c++ github java mpi programming more...
Hao Zheng	student facilitator	aws bash data-management git java project-management python pytorch more...
Hening Cui	student facilitator	bioinformatics biology cleanup data-analysis java machine-learning natural-language-processing neural-networks more...
Hyungil Kye	student facilitator	big-data c++ machine-learning monte-carlo python r sql	big-data machine-learning monte-carlo python r
Ibrahim Sheikh	student facilitator mentor regional facilitator researcher/educator rcf	benchmarking community-outreach debugging deep-learning dependencies encryption geographic-information-system git more...	backup benchmarking community-outreach computational-chemistry deep-learning file-formats gamess geographic-information-system more...
Iryna Chornopys	student facilitator	anaconda cleanup data-analysis github python sql xml
Ifeoma Ugwuanyi	student facilitator	bioinformatics biology data-analysis genomics python r sql	anaconda big-data bioinformatics biology data-analysis data-wrangling genomics python more...
Jaini Bhavsar	student facilitator	anaconda bash conda github jupyterhub machine-learning python scripting more...
Jaivik Patel	student facilitator	bash c c++ compiling debugging git github java more...
Jason Diaz	student facilitator	java python
James Chen	student facilitator	c c++ machine-learning neural-networks programming programming-best-practices python	ai anaconda big-data c c++ cybersecurity data-science jupyterhub more...
Juan Florentino	student facilitator	file-formats hardware python software-installation
John Acheampong	student facilitator	biology conda github programming-best-practices python software-installation
Jesse Sandberg	student facilitator	management molecular-dynamics professional-development project-management python workforce-development	bash c++ computational-chemistry deep-learning geographic-information-system machine-learning management matlab more...
John Goodhue	mentor steering committee	programming python sciencedmz storage
Kenneth Acosta	student facilitator	bash bioinformatics biology conda genomics github pip python more...	batch-jobs cluster-management cluster-support data-management data-transfer distributed-computing programming-best-practices scheduling
Katie Salas	student facilitator	community-outreach data-analysis data-lifecycle data-wrangling python r sql workflow
Muhammad Khiza…	student facilitator	ai bash big-data c c++ cuda git image-processing more...
Katherine Nelson	mentor rcf steering committee	astrophysics bash batch-jobs cluster-support compiling conda debugging environment-modules more...	acls astrophysics bash batch-jobs c++ compiling conda debugging more...
Kenneth Bundy	mentor	anaconda aws azure bash batch-jobs c c++ cloud-commercial more...
Krutika Patel	student facilitator	ai anaconda bash github java putty python r more...
Thomas Langford	mentor rcf	big-data containers monte-carlo mpi parallelization particle-physics python quantum-mechanics more...
Lauren Hill-Beaton	mentor	anaconda arcgis conda geographic-information-system netcdf ondemand pip programming more...	arcgis geographic-information-system python
Lenore Martin	researcher/educator	administering-hpc amber anaconda backup bash bioinformatics biology charmm more...	administering-hpc ai amber anaconda bioinformatics biology charmm community-outreach more...
Dylan Le	student facilitator	bash c++ monte-carlo mpi programming programming-best-practices python	ai big-data cloud-commercial cloud-open-source cluster-support cybersecurity deep-learning machine-learning more...
Minxiu Shi	student facilitator	archiving big-data data-analysis data-management-software data-wrangling git python r more...
Madhukara Keku…	student facilitator	ai anaconda api aws bash big-data c conda more...
Nihar Biradar	student facilitator	api c++ cleanup git github java matlab memory more...	ai astrophysics aws batch-jobs cloud-open-source cloud-storage computational-fluid-dynamics cpu-architecture more...
Parth Shah	student facilitator	anaconda big-data c c++ cybersecurity data-analysis debugging deep-learning more...
Qingdou Han	student facilitator	bash data-analysis data-reproducibility data-wrangling git github github-pages machine-learning more...
Parameshwaran …	student facilitator	abaqus anaconda api batch-jobs comsol data-science deep-learning finite-element-analysis more...	abaqus bash batch-jobs big-data comsol data-science deep-learning environment-modules more...
Richard Le	student facilitator	bash c++ compiling debugging pip programming-best-practices python software-installation	ai big-data deep-learning image-processing machine-learning natural-language-processing
Richa Gautam	student facilitator	aws big-data compiling conda data-wrangling debugging machine-learning matlab more...	ai big-data data-management data-wrangling deep-learning linear-programming machine-learning matlab more...
Ritesh Bachhar	student facilitator	anaconda astrophysics c fortran git github machine-learning mathematica more...	api astrophysics bash batch-jobs c++ compiling cpu-architecture cuda more...
Rob Coyne	mentor researcher/educator	astrophysics python	astrophysics bash machine-learning mpi python scripting
Ryan De Lorenzo	student facilitator	anaconda bash c c++ conda data-analysis jupyterhub matlab more...
Yuan Qu	student facilitator	ai bash data-management deep-learning git machine-learning matlab python more...
Santhosh Alagi…	student facilitator	python r sftp sql
Siddh Agarwal	student facilitator	python	bash github natural-language-processing
Sander Cohen-Janes	student facilitator	anaconda bash benchmarking dft gaussian github mathematica python more...	c git python r xsede
Shagesh Sridharan	student facilitator	c++ data-analysis linear-programming machine-learning monte-carlo neural-networks programming python more...
Suhong Li	mentor researcher/educator	anaconda big-data cleanup data-analysis data-wrangling github machine-learning natural-language-processing more...
Matthew Smalley	student facilitator	bash c++ containers cybersecurity file-systems gce programming putty more...
Stanley Nwoji	researcher/educator	anaconda aws azure big-data c c++ community-outreach conda more...	big-data community-outreach conda data-analysis deep-learning genomics image-processing julia more...
Seth Rosen	student facilitator	bash big-data c compiling data-analysis debugging deep-learning encryption more...
Sydney Shearer	student facilitator	anaconda data-analysis data-wrangling java machine-learning professional-development programming project-management more...
Shawn Sivy	rcf cise	acls backup bash batch-jobs cifs compiling containers cuda more...
Ying-Chih Sun	student facilitator	ai archiving backup big-data data-analysis data-management data-sharing file-formats more...	ai big-data data-analysis data-management data-management-software linear-programming machine-learning mathematica more...
Tejasvi Munge	student facilitator	anaconda data-analysis java jupyterhub matlab pip putty python more...	biology c data-analysis data-wrangling deep-learning image-processing java machine-learning more...
William Feng	student facilitator	bioinformatics biology data-analysis genomics java programming programming-best-practices python more...
Wyatt Carbonell	student facilitator	java python	astrophysics particle-physics quantum-computing quantum-mechanics
Xuejing Wang	student facilitator	arcgis finite-element-analysis git materials-science python r

CI Links

Title	Category	Tags	Skill Level
Advanced Mathematical Optimization Techniques	Learning	optimization, python	Beginner, Intermediate, Advanced
AHPCC documentary	Docs	login, batch-jobs, slurm, bash, ssh, python, mpi	Beginner, Intermediate
Applications of Machine Learning in Engineering and Parameter Tuning Tutorial	Learning	data-analysis, machine-learning, python	Beginner, Intermediate
Automated Machine Learning Book	Learning	ai, data-analysis, deep-learning, machine-learning, neural-networks, python, r	Intermediate, Advanced
Awesome Jupyter Widgets (for building interactive scientific workflows or science gateway tools)	Learning	ai, computer-graphics, plotting, visualization, big-data, data-analysis, deep-learning, image-processing, machine-learning, monte-carlo, neural-networks, data-sharing, data-lifecycle, data-management, data-management-software, data-reproducibility, github, astrophysics, data-science, novel-accelerators, computational-chemistry, genomics, materials-science, gravitational-waves, oceanography, particle-physics, physiology, psychology, quantum-computing, quantum-mechanics, biology, ondemand, science gateway, c++, jupyterhub, python	Beginner, Intermediate, Advanced
Biopython Tutorial	Learning	bioinformatics, genomics, python	Beginner, Intermediate, Advanced
Cornell Virtual Workshop	Learning	performance-tuning, python, r, matlab, slurm, mpi, cuda, file-transfer, globus	Beginner, Intermediate, Advanced
CUDA Toolkit Documentation	Docs	documentation, c, c++, fortran, python	Intermediate, Advanced
DeapSECURE – Data-Enabled Advanced Computational Training Platform for Cybersecurity Research and Education	Learning	ai, visualization, big-data, data-analysis, deep-learning, machine-learning, neural-networks, jekyll, batch-jobs, slurm, bash, ssh, technical-training-for-hpc, training, workforce-development, python, scikit-learn, cybersecurity	Beginner
Globus Documentation	Docs	cloud-storage, data-sharing, data-management, data-management-software, data-transfer, data-wrangling, file-transfer, globus, s3, dtn, python, data-security, data-compliance, federated-authentication, secure-data-architecture	Beginner, Intermediate, Advanced
GPU Computing Workshop Series for the Earth Science Community	Learning	optimization, performance-tuning, profiling, parallelization, github, pytorch, tensorflow, oceanography, gpu, hpc-arch-and-perf, PROFESSIONAL and WORKFORCE DEVELOPMENT, technical-training-for-hpc, PROGRAMMING LANGUAGES FRAMEWORKS AND IDEs, c, c++, fortran, cuda, jupyterhub, programming, programming-best-practices, python	Beginner
How the Little Jupyter Notebook Became a Web App: Managing Increasing Complexity with nbdev	Learning	data-sharing, data-management-software, data-reproducibility, github, workflow, astrophysics, data-science, novel-accelerators, computational-chemistry, genomics, materials-science, gravitational-waves, oceanography, particle-physics, physiology, psychology, quantum-computing, quantum-mechanics, biology, science gateway, software-carpentry, jupyterhub, programming, python	Beginner, Intermediate, Advanced
HPC University	Learning	python, r, matlab, mpi, compiling, debugging, professional-development	Beginner, Intermediate, Advanced
HPCwire	Website	documentation, bioinformatics, pytorch, data-science, hpc-operations, technical-training-for-hpc, programming, programming-best-practices, python	Beginner, Intermediate, Advanced
Intro to Statistical Computing with Stan	Docs	data-analysis, machine-learning, monte-carlo, python	Beginner, Intermediate
Introduction to Python for Digital Humanities and Computational Research	Docs	ai, big-data, data-analysis, deep-learning, data-science, python	Beginner
MDAnalysis - Python library for the analysis of molecular dynamics simulations	Tool	computational-chemistry, materials-science, python	Beginner, Intermediate, Advanced
NCSA HPC Training Moodle	Learning	performance-tuning, profiling, parallelization, lustre, technical-training-for-hpc, training, workforce-development, openmp, python, mpi, cybersecurity	Beginner, Intermediate
Optimizing Research Workflows - A Documentation of Snakemake	Docs	documentation, data-analysis, data-reproducibility, workflow, bioinformatics, data-science, python	Intermediate, Advanced
Python	Learning	python	Beginner
Python Tools for Data Science	Video	ai, big-data, data-analysis, machine-learning, data-wrangling, data-science, technical-training-for-hpc, training, workforce-development, python, scikit-learn, sql	Intermediate
Quick and Robust Data Augmentation with Albumentations Library	Tool	deep-learning, python	Advanced
Recommended Libraries for Cyberinfrastructure Users Developing Jupyter Notebooks	Website	ai, big-data, data-analysis, machine-learning, data-sharing, data-lifecycle, data-management, data-management-software, data-reproducibility, data-wrangling, github-pages, workflow, astrophysics, data-science, computational-chemistry, genomics, materials-science, gravitational-waves, oceanography, particle-physics, physiology, psychology, quantum-computing, quantum-mechanics, biology, science gateway, conda, jupyterhub, python	Beginner, Intermediate, Advanced
Reinforcement Learning For Beginners with Python	Video	deep-learning, machine-learning, tensorflow, training, programming-best-practices, python	Beginner
Research Software Development in JupyterLab: A Platform for Collaboration Between Scientists and RSEs	Learning	ai, visualization, big-data, data-analysis, deep-learning, machine-learning, astrophysics, data-science, novel-accelerators, computational-chemistry, genomics, materials-science, gravitational-waves, oceanography, particle-physics, physiology, psychology, quantum-computing, quantum-mechanics, biology, ondemand, science gateway, c++, jupyterhub, python, r	Beginner, Intermediate
Science Gateway Tool/Web App Template (Jupyter Notebook + ipywidgets)	Learning	data-analysis, github, astrophysics, data-science, novel-accelerators, computational-chemistry, genomics, materials-science, gravitational-waves, oceanography, particle-physics, physiology, psychology, quantum-computing, quantum-mechanics, biology, ondemand, science gateway, jupyterhub, python	Beginner
Scipy Lecture Notes	Learning	visualization, data-analysis, machine-learning, python	Beginner, Intermediate
Setting up PyFR flow solver on clusters	Learning	faster, computational-fluid-dynamics, c++, cuda, python, mpi, software-installation	Advanced
Using Dask on HPC Systems	Learning	technical-training-for-hpc, jupyterhub, python	Beginner, Intermediate
Using Linux commands in a python script (and the difference between the subprocess and os python modules)	Learning	programming, python	Beginner, Intermediate

Projects

Project Title	Project Institution	Project Owner	Tags	Status
Expanding computational resources for gravitational wave detection pipelines in medium-latency and beyond	University of Rhode Island	Gaurav Khanna	ANALYSES and ALGORITHMS, astrophysics, benchmarking, data-transfer, gravitational-waves, parallelization, python, scheduling	In Progress
Remote sensing data management for large-area forest mapping projects	University of Maine	Kasey Legaard	api, data-management, data-sharing, geographic-information-system, python, sql	In Progress
Transformer-Models for Translating Tax Code	University of Connecticut - Stamford	Andrew Sherman	ai, natural-language-processing, python	In Progress
Developing deep learning algorithms to analyze Raman spectral data for brain cancer diagnosis	Southern CT State University	Binlin Wu	gpu, image-processing, machine-learning, neural-networks, python	Halted
High throughput Python pipeline to identify Horizontal Gene Transfer	Cabrini University	Vinayak Mathur	bioinformatics, biology, data-wrangling, genomics, github, python, workflow	Halted
Metagenomic analysis to identify gene clusters associated with IgA production	SUNY Upstate Medical University	Joel Wilmore	bioinformatics, biology, genomics, python, r, research-facilitation	Finishing Up
Deep convolutional neural networks (dCNN) for image segmentation, instance labeling, and tracking.	University of Delaware	Anita Schwartz	bash, bioinformatics, computational-chemistry, debugging, machine-learning, programming, python, scripting, slurm, software-installation, tensorflow	Complete
An optimized search algorithm for gravitational waves from post-merger remnants	University of Rhode Island	Gaurav Khanna	astrophysics, conda, cuda, gpu, parallelization, python	Complete
High Performance Computing vs Quantum Computing for Neural Networks supporting Artificial Intelligence	Pace University	Avery Leider	ai, big-data, deep-learning, github, hpc-cluster-architecture, hpc-operations, jupyterhub, machine-learning, natural-language-processing, proposal-development, python, quantum-mechanics, research-facilitation, research-grants, resources, scikit-learn, singularity, technical-training-for-hpc, vectorization	Complete
Deep learning for biomedical image analysis	Southern Connecticut State University	Binlin Wu	ai, big-data, deep-learning, gpu, machine-learning, matlab, python, tensorflow	Complete
Project WiCCED ML	University of Delaware	Anita Schwartz	docker, hadoop, jupyterhub, kubernetes, machine-learning, programming-best-practices, python, r, software-installation, spark, tensorflow, tuning	Complete
Calculation of Polymer Hydrophobicity	Penn State-New Kensington	Rob Mathers	cleanup, git, github, optimization, python	Complete
Assembly and Taxonomic Profiling of Metagenomic Sequences using Deep Learning	University of Rhode Island	Gaurav Khanna	ai, bioinformatics, biology, deep-learning, gpu, hardware, machine-learning, neural-networks, python	Complete
Establish Computational Analysis Infrastructure for the CCRI 16-inch Telescope.	Community College of Rhode Island	Gaurav Khanna	astrophysics, data-analysis, git, python, research-facilitation, scripting	Complete
US Tax Code to Natural Language Parsable Data for Programming Languages	University of Connecticut - Stamford	Katherine Nelson	natural-language-processing, python, sql	Complete
Vector Representation with a Finance Corpus	Rhode Island College	Gaurav Khanna	bash, batch-jobs, deep-learning, distributed-computing, machine-learning, programming, python, research-facilitation, ssh	Complete
Statistical Analysis of criminal cases in the United States District Court of Puerto Rico	Salve Regina University	Gaurav Khanna	ai, data-analysis, machine-learning, python	Complete
Understanding Covid-19 Pandemic through Social Media Discussion	Bryant University	Gaurav Khanna	ai, data-analysis, natural-language-processing, programming, programming-best-practices, python	Complete
Investigating the Association between Environmental Characteristics and Psychological Well-Being	Kean University	Galen Collier	ai, api, data-analysis, geographic-information-system, image-processing, machine-learning, programming, programming-best-practices, python	Complete
Deep-learning facilitated microscopy for the dissection of durable resistance to plant disease.	University of Delaware	Anita Schwartz	deep-learning, python	Complete

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On-line Deep Learning Workshop August 24!