HPC Getting Started

Resources

Title	Category	Tags	Skill Level
Wiki for Onboarding onto the C3DDB Cluster at MGHPCC	Learning	HPC Getting Started, Site-Specific, MGHPCC	Beginner

Projects

Project Title	Project Institution	Project Owner	Tags	Status
Amsterdam Modeling Suite Software Usage on Penn State’s Roar Computer Clusters	Penn State University - Altoona Campus	Jeffrey Nucciarone	Researcher-facing, DomainSpecific, computational chemistry, Quantum-Mechanics, HPC Getting Started, Tools/Techniques, batch jobs, job sizing, scheduling, terminal emulation/window management, Systems-facing, hpc operations, accounts, provisioning, permissions, hw/sw integration, HPC, scheduler, pbs, ClusterSupport, file-transfer, putty, ssh, Management/Professional Development, Technical Training for HPC, unclassified, CyberInfrastructure, HPCs	In Progress

Student Facilitators

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Mentors and Regional Facilitators

Name	Region	Skills	Interests
Shelley Knuth	RMACC	data management HPC Getting Started professional development
Anita Orendt	RMACC	batch jobs computational chemistry environment-modules gaussian HPC HPC Getting Started Management/Professional Development SoftwareInstallation
Andy Monaghan	RMACC	bash batch jobs Compiling conda containers globus HPC Getting Started job sizing r resources scheduling scripting slurm unix environment
Torey Battelle	MINES	accounts Compiling computational chemistry dependencies gpfs HPC Getting Started HPCs Molecular-Dynamics permissions Quantum-Mechanics scheduling slurm SoftwareInstallation unix environment
Kyle Hutson	Great Plains	bash batch jobs ceph CUI filesystem HPC Getting Started internet putty sftp ssh tcp Technical Training for HPC
Brian Haymore	RMACC	accounts acls backup bash batch jobs ceph cgroups cifs ClusterSupport Community Outreach Compiling cpus cuda dtn environment-modules file-transfer filesystem firewall gpus graphics hardware hardware architecture HPC HPC Cluster build HPC Getting Started hpc operations hw/sw integration ib internet lustre network networking nfs OS permissions provisioning putty s3 samba scheduler scheduling ScienceDMZ scripting sftp slurm smb SoftwareInstallation ssh Storage storage storage Systems-facing tcp Technical Training for HPC terminal emulation/window management unix environment x11	accounts acls archive aws azure backup bash batch jobs ceph cgroups cifs Cloud - Commercial Cloud - Open source Cloud/VM cloudlab ClusterSupport Community Outreach Compiling containers cpus data management Data-facing data-lifecycle distributed computing dtn environment-modules file-transfer filesystem firewall gce globus gpfs gpus graphics hardware hardware architecture HPC HPC Cluster build HPC Getting Started hpc operations hw/sw integration ib internet jetstream job sizing kubernetes lustre Management/Professional Development network networking nfs ondemand open on-demand openshift openstack OS osg parallelization performance permissions Platform privacy professional development Project Management provisioning putty Researcher-facing resources s3 samba scheduler scheduling ScienceDMZ scripting sdn sftp slurm smb SoftwareInstallation ssh Storage storage storage Systems-facing tcp Technical Training for HPC terminal emulation/window management unix environment visualization vpn vpn Workforce Development x11
Kaylea Nelson	CAREERS	Astrophysics bash batch jobs ClusterSupport Compiling conda debugging environment-modules file-transfer globus HPC HPC Getting Started job sizing mpi mpi parallelism performance programming programming best practices python Researcher-facing resources scheduling scripting sftp slurm SoftwareInstallation ssh unix environment x11	acls Astrophysics bash batch jobs c++ Compiling conda Data-facing debugging distributed computing environment-modules gpfs HPC Getting Started job sizing linear programming mpi mpi open on-demand parallelism performance programming best practices Programming Languages and Software Support python Researcher-facing resources scheduling scripting slurm storage
Chris Carothers	CAREERS	cpus cuda filesystem gpus hardware architecture HPC Getting Started Machine-Learning mpi mpi parallelization Simulations slurm
Neil McGlohon	CAREERS	HPC HPC Getting Started mpi programming	distributed computing HPC HPCs parallelism python
Andrew Sherman	CAREERS	Compiling cuda debugging distributed computing HPC HPC Getting Started matlab mpi mpi parallelism parallelization parallelization Parametersweeps performance programming slurm SoftwareInstallation vectorization
Carrie Brown	Great Plains	bash batch jobs conda condor containers data wrangling distributed computing fastx HPC Getting Started python r resources sas slurm
Chuck Pavloski	CAREERS	archive ClusterSupport CyberInfrastructure data management Data-facing data-lifecycle DomainSpecific filesystem hardware HPC HPC Getting Started hpc operations HPCs Management/Professional Development Researcher-facing science gateway ScienceDMZ security Simulations storage Systems-facing Technical Training for HPC Tools/Techniques
Jeffrey Nucciarone	CAREERS	archive bash big data ClusterSupport Community Outreach CyberSecurity data handling Deep-Learning filesystem gaussian HPC HPC Getting Started Machine-Learning matlab mpi open on-demand professional development programming best practices Technical Training for HPC
Timothy Middelkoop	Great Plains	batch jobs containers CyberInfrastructure HPC Getting Started networking python Workforce Development
Keri Toksu	Northeast	bash batch jobs HPC Getting Started NaturalLanguageProcessing open on-demand programming Programming Languages and Software Support python resources scheduling slurm Technical Training for HPC website
Gaurav Khanna	CAREERS, Northeast	Astrophysics bash batch jobs c++ Cloud/VM ClusterSupport Compiling cpus cuda dependencies distributed computing DomainSpecific gpus hardware hardware architecture HPC HPC Cluster build HPC Getting Started hpc operations hw/sw integration Industrial Relations Management jupyterhub Management/Professional Development mathematica matlab MGHPCC mpi mpi OS parallelism parallelization parallelization performance professional development programming Project Management Proposal Development Quantum-Mechanics Researcher-facing resources scheduling sftp Simulations SoftwareInstallation ssh Systems-facing Tools/Techniques unix environment vectorization vpn Workforce Development

Researchers and Educators

Name	Skills	Interests
Gaurav Khanna	Astrophysics bash batch jobs c++ Cloud/VM ClusterSupport Compiling cpus cuda dependencies distributed computing DomainSpecific gpus hardware hardware architecture HPC HPC Cluster build HPC Getting Started hpc operations hw/sw integration Industrial Relations Management jupyterhub Management/Professional Development mathematica matlab MGHPCC mpi mpi OS parallelism parallelization parallelization performance professional development programming Project Management Proposal Development Quantum-Mechanics Researcher-facing resources scheduling sftp Simulations SoftwareInstallation ssh Systems-facing Tools/Techniques unix environment vectorization vpn Workforce Development

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