scripting

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Projects

Project Title	Project Institution	Project Owner	Tags	Status
Deep convolutional neural networks (dCNN) for image segmentation, instance labeling, and tracking.	University of Delaware	Anita Schwartz	bash, bioinformatics, computational-chemistry, debugging, domain-specific, hpc, machine-learning, programming, programming-languages, python, researcher-facing, scripting, slurm, software-installation, tensorflow, visualization	Complete
Physical chemistry studies of environmental pollutant transformations: SIMION modeling of ion behavior in an electric field	New Jersey Institute of Technology	Galen Collier	computational-chemistry, domain-specific, particle-physics, programming, researcher-facing, scripting	On Hold
Electrostatics of the GABA(A) receptor pore	Rutgers University–Camden	Galen Collier	bash, domain-specific, molecular-dynamics, namd, programming, programming-best-practices, programming-languages, researcher-facing, scripting, slurm	In Progress
Establish Computational Analysis Infrastructure for the CCRI 16-inch Telescope.	Community College of Rhode Island	Gaurav Khanna	astrophysics, cyberinfrastructure, data-analysis, documentation, git, hpc, python, remote-servers, research-facilitation, scripting	Complete

Users

Name	Roles	Skills	Interests
Michael Strickler	mentor rcf	batch-jobs compiling conda easybuild hpc-getting-started modules nfs screen more...	gpus hpc-cluster-build slurm
Anita Schwartz	mentor steering committee rcf	bash batch-jobs cluster-support containers data-facing data-management distributed-computing environment-modules more...
Kaylea Nelson	mentor steering committee rcf	astrophysics bash batch-jobs cluster-support compiling conda debugging environment-modules more...	acls astrophysics bash batch-jobs c++ compiling conda data-facing more...
Richa Gautam	student facilitator	aws big-data compiling conda data-wrangling debugging machine-learning matlab more...	ai big-data data-management data-wrangling deep-learning linear-programming machine-learning matlab more...
Matthew Smalley	student facilitator	bash c++ containers cybersecurity file-systems gce programming putty more...
Igor Nachevnik	student facilitator	account acls archiving azure backup bash batch-jobs cifs more...	aws azure big-data cloud compiling conda containers cyberinfrastructure more...
Kenneth Acosta	student facilitator	bash bioinformatics biology conda genomics github pip python more...	batch-jobs cloud cluster cluster-management cluster-support data-management data-transfer distributed-computing more...
Christopher Nadeau	student facilitator	astrophysics python quantum-mechanics scripting unix-environment
Daniel Evans	researcher/educator	c c++ cleanup compiling file-formats git programming programming-languages more...
Carrie Brown	mentor	bioinformatics cleanup community-outreach data-wrangling distributed-computing genomics github github-pages more...	hpc-getting-started htc
Ryan De Lorenzo	student facilitator	anaconda bash c c++ conda data-analysis jupyterhub matlab more...

Mentors and Regional Facilitators

Name	Region	Skills	Interests
Michael Strickler	Campus Champions, CAREERS	batch-jobs compiling conda easybuild hpc-getting-started modules nfs screen more...	gpus hpc-cluster-build slurm
Anita Schwartz	CAREERS	bash batch-jobs cluster-support containers data-facing data-management distributed-computing environment-modules more...
Andy Monaghan	Campus Champions, RMACC	bash batch-jobs compiling conda containers globus hpc-getting-started job-sizing more...
Martin Cuma	RMACC	bash batch-jobs c++ compiling debugging distributed-computing environment-modules job-sizing more...	bash batch-jobs c++ compiling comsol conda containers cpus more...
Brian Haymore	RMACC	account acls backup bash batch-jobs ceph cgroups cifs more...	account acls archiving aws azure backup bash batch-jobs more...
Kaylea Nelson	Campus Champions, CAREERS	astrophysics bash batch-jobs cluster-support compiling conda debugging environment-modules more...	acls astrophysics bash batch-jobs c++ compiling conda data-facing more...
Grant Scott	Great Plains	ai aws bash big-data c++ cloud compiling containers more...	cloud data-facing management/professional-development researcher-facing
James Deaton	Campus Champions, Great Plains	archiving bash cgroups community-outreach conda containers cyberinfrastructure data-wrangling more...
Jacob Pessin	Northeast	aws bash batch-jobs big-data bioinformatics cloud cloud-storage cluster-support more...
Shaohao Chen	Northeast	ai bash batch-jobs compiling containers cuda debugging deep-learning more...
Wirawan Purwanto	Campus Champions, Northeast	bash batch-jobs c++ mpi python scripting
Mike Renfro	Campus Champions	administering-hpc anaconda bash conda environment-modules fortran git github more...
Mike Hutcheson	Campus Champions	administering-hpc api array-job bash batch-jobs benchmarking c c++ more...
Evan Linde	Campus Champions	bash cloud scripting software-carpentry sql	ceph cui cybersecurity key-management kubernetes nist-800-171 openstack s3
Jacob Fosso Tande	Campus Champions	administering-hpc azure bash c++ cloud cluster-support community-outreach compiling more...
Kevin Bryan	Campus Champions	account bash c c++ cluster-management compiling debugging dependencies more...	archiving data-transfer deep-learning professional-development security
Charles Forsyth	Campus Champions	account acls administering-hpc anaconda aws backup bash batch-jobs more...	administering-hpc data-facing general management/professional-development research-computing researcher-facing systems-facing
Carrie Brown	CAREERS	bioinformatics cleanup community-outreach data-wrangling distributed-computing genomics github github-pages more...	hpc-getting-started htc
Jeff Dusenberry	Northeast	batch-jobs cpus cyberinfrastructure debugging fortran gpus hpc hpc-tools more...

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