scripting

Resources

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Projects

Project Title	Project Institution	Project Owner	Tags	Status
Deep convolutional neural networks (dCNN) for image segmentation, instance labeling, and tracking.	University of Delaware	Anita Schwartz	Researcher-facing, Domain-Specific, bioinformatics, computational-chemistry, machine-learning, visualization, Programming-languages-and-software-support, scripting, programming, python, bash, HPC, slurm, Software-installation, tensorflow, debugging	In Progress
End-to-end learning of protein-protein interactions	Rutgers University–Camden	Galen Collier	Researcher-facing, Domain-Specific, bioinformatics, computational-chemistry, machine-learning, visualization, Programming-languages-and-software-support, programming-best-practices, scripting, programming, python, bash, HPC, slurm, Software-installation, tensorflow, tuning, debugging	In Progress
Physical chemistry studies of environmental pollutant transformations: SIMION modeling of ion behavior in an electric field	New Jersey Institute of Technology	Galen Collier	Researcher-facing, Domain-Specific, computational-chemistry, particle-physics, scripting, programming	New and Recruiting
Physical chemistry studies of environmental pollutant transformations: mass spectra analysis	New Jersey Institute of Technology	Galen Collier	Researcher-facing, Domain-Specific, computational-chemistry, particle-physics, scripting, programming, matlab	New and Recruiting
Physical chemistry studies of environmental pollutant transformations: LabVIEW codes for electrostatic collection and analysis of aerosol nanoparticles	New Jersey Institute of Technology	Galen Collier	Researcher-facing, Domain-Specific, computational-chemistry, particle-physics, scripting, programming	New and Recruiting
Physical chemistry studies of environmental pollutant transformations: MATLAB codes for morphological analysis of fractal soot aggregates	New Jersey Institute of Technology	Galen Collier	Researcher-facing, Domain-Specific, computational-chemistry, particle-physics, scripting, programming, matlab	New and Recruiting
Electrostatics of the GABA(A) receptor pore	Rutgers University–Camden	Galen Collier	Researcher-facing, Domain-Specific, molecular-dynamics, namd, Programming-languages-and-software-support, programming-best-practices, scripting, programming, bash, slurm	In Progress

Student Facilitators

Name	Skills	Interests
Richa Gautam	aws big-data compiling conda data-handling data-wrangling debugging machine-learning more...	AI big-data data-handling Data-Management data-wrangling deep-learning linear-programming machine-learning more...
Matthew Smalley	bash c++ containers cybersecurity file-system gce networking programming more...
Igor Nachevnik	accounts acls archive azure backup bash batch-jobs cifs more...	aws azure big-data Cloud/vm compiling conda containers cyberinfrastructure more...
Kenneth Acosta	bash bioinformatics biology conda genomics github pip python more...	batch-jobs cloud Cloud/vm cluster cluster-management Cluster-support Data-Management data-transfer more...
Christopher Nadeau	astrophysics python quantum-mechanics scripting unix-environment

Mentors and Regional Facilitators

Name	Region	Skills	Interests
Michael Strickler	CAREERS	batch-jobs compiling conda hpc-getting-started nfs scripting sge unix-environment	gpus hpc-cluster-build slurm
Anita Schwartz	CAREERS	bash batch-jobs Cluster-support containers Data-facing Data-Management distributed-computing environment-modules more...
Andy Monaghan	RMACC	bash batch-jobs compiling conda containers globus hpc-getting-started job-sizing more...
Martin Cuma	RMACC	bash batch-jobs c++ compiling debugging distributed-computing environment-modules job-sizing more...	bash batch-jobs c++ compiling comsol conda containers cpus more...
Brian Haymore	RMACC	accounts acls backup bash batch-jobs ceph cgroups cifs more...	accounts acls archive aws azure backup bash batch-jobs more...
Kaylea Nelson	CAREERS	astrophysics bash batch-jobs Cluster-support compiling conda debugging environment-modules more...	acls astrophysics bash batch-jobs c++ compiling conda Data-facing more...
Grant Scott	Great Plains	AI aws bash big-data c++ Cloud/vm compiling containers more...	Cloud/vm Data-facing Management/Professional Development Researcher-facing
James Deaton	Great Plains	archive bash cgroups Community-Outreach conda containers cyberinfrastructure data-wrangling more...
Jacob Pessin	Northeast	aws bash batch-jobs big-data bioinformatics Cloud/vm Cluster-support condor more...
Shaohao Chen	Northeast	AI bash batch-jobs compiling containers cuda debugging deep-learning more...
Wirawan Purwanto	Northeast	bash batch-jobs c++ mpi python scripting

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