genomics

Name	Region	Skills	Interests
Rob Harbert	Northeast	anaconda array-job batch-jobs big-data bioinformatics biology cluster distributed-computing more...
Diana Dugas	RMACC, SWEETER, Campus Champions	bioinformatics biology cyberinfrastructure genomics hpc-getting-started proposal-development research-computing research-facilitation more...
Carrie Brown	CAREERS	bioinformatics cleanup community-outreach data-wrangling distributed-computing genomics github github-pages more...	hpc-getting-started htc
Jordan Hayes	Campus Champions	acls administering-hpc amber anaconda api array-job atlas aws more...

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Name	Roles	Skills	Interests
Kenneth Acosta	student facilitator	bash bioinformatics biology conda genomics github pip python more...	batch-jobs cloud cluster cluster-management cluster-support data-management data-transfer distributed-computing more...
Younes Shafter	student facilitator	anaconda big-data bioinformatics computational-chemistry ddocent deep-learning fastx gatk more...	hpc
Chris Hemme	researcher/educator	anaconda big-data bioinformatics biology data-analysis genomics r research-computing more...	anaconda big-data bioinformatics biology data-analysis genomics python r more...
Carrie Brown	mentor steering committee	bioinformatics cleanup community-outreach data-wrangling distributed-computing genomics github github-pages more...	hpc-getting-started htc
Vinayak Mathur	researcher/educator	bioinformatics biology genomics
Emma Strand	student facilitator	anaconda archiving bash big-data bioinformatics biology cluster community-outreach more...
Xiaoluo Jiao	student facilitator	bioinformatics biology cleanup data-management data-reproducibility data-science-support data-wrangling genomics more...	python sql
Ifeoma Ugwuanyi	student facilitator	bioinformatics biology data-analysis genomics hpc notebooks python r more...	anaconda big-data bioinformatics biology data-analysis data-wrangling genomics hpc more...

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Project Title	Project Institution	Project Owner	Tags	Status
Metagenomic analysis to identify gene clusters associated with IgA production	SUNY Upstate Medical University	Joel Wilmore	bioinformatics, biology, collaboration, genomics, python, r, research-computing, research-facilitation	In Progress
Host-symbiont population genomics - analyzing the intraspecific variability of methanogenic archaeal endosymbionts of genus Methanocorpusculum hosted by a marine anaerobic ciliate Metopus sp. (Metopida)	University of Rhode Island -- Bay Campus	Gaurav Khanna	bioinformatics, biology, cluster, genomics	In Progress
High throughput Python pipeline to identify Horizontal Gene Transfer	Cabrini University	Vinayak Mathur	bioinformatics, biology, data-wrangling, genomics, github, python, workflow	In Progress
Coral Genomics: An assessment of metabolic pathways and genes influencing coral bleaching. Implications for the development of hydra as a model organism.	Wilmington University	Anita Schwartz	genomics, hpc	Complete

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