| Deep convolutional neural networks (dCNN) for image segmentation, instance labeling, and tracking. |
University of Delaware |
Anita Schwartz |
Researcher-facing, Domain-Specific, bioinformatics, computational-chemistry, machine-learning, visualization, Programming-languages-and-software-support, scripting, programming, python, bash, HPC, slurm, Software-installation, tensorflow, debugging |
In Progress |
Jeffrey Caplan |
| End-to-end learning of protein-protein interactions |
Rutgers University–Camden |
Galen Collier |
Researcher-facing, Domain-Specific, bioinformatics, computational-chemistry, machine-learning, visualization, Programming-languages-and-software-support, programming-best-practices, scripting, programming, python, bash, HPC, slurm, Software-installation, tensorflow, tuning, debugging |
In Progress |
Guillaume Lamoureux |
| Model Mie scattering and light propagation through a high scattering medium using Monte Carlo simulation |
Southern Connecticut State University |
Binlin Wu |
data-handling, Simulations, monte-carlo, scheduling, programming, matlab |
In Progress |
Binlin Wu |
| Deep learning for biomedical image analysis |
Southern Connecticut State University |
Binlin Wu |
big-data, AI, deep-learning, machine-learning, python, matlab, gpus, tensorflow |
In Progress |
Binlin Wu |
| Optimization of Mouse Social Behavior Data Analyses Pipeline |
University of Delaware |
Anita Schwartz |
batch-jobs, job-sizing, scheduling, matlab, environment-modules, bash, unix-environment, lustre, nfs, slurm, sge, putty, x11, ssh |
In Progress |
Josh Neunuebel |
| Physical chemistry studies of environmental pollutant transformations: SIMION modeling of ion behavior in an electric field |
New Jersey Institute of Technology |
Galen Collier |
Researcher-facing, Domain-Specific, computational-chemistry, particle-physics, scripting, programming |
New and Recruiting |
Alexei Khalizov |
| Physical chemistry studies of environmental pollutant transformations: mass spectra analysis |
New Jersey Institute of Technology |
Galen Collier |
Researcher-facing, Domain-Specific, computational-chemistry, particle-physics, scripting, programming, matlab |
New and Recruiting |
Alexei Khalizov |
| Physical chemistry studies of environmental pollutant transformations: LabVIEW codes for electrostatic collection and analysis of aerosol nanoparticles |
New Jersey Institute of Technology |
Galen Collier |
Researcher-facing, Domain-Specific, computational-chemistry, particle-physics, scripting, programming |
New and Recruiting |
Alexei Khalizov |
| Physical chemistry studies of environmental pollutant transformations: MATLAB codes for morphological analysis of fractal soot aggregates |
New Jersey Institute of Technology |
Galen Collier |
Researcher-facing, Domain-Specific, computational-chemistry, particle-physics, scripting, programming, matlab |
New and Recruiting |
Alexei Khalizov |
| Parallel analysis of variants in multiple bear genomes |
Rutgers University–Camden |
Galen Collier |
Researcher-facing, Domain-Specific, bioinformatics, Data-Facing |
In Progress |
Andrey Grigoriev |
| Hybrid systems and LIFE methods for Mycobacterium tuberculosis |
Rutgers-Camden |
Sean McQuade |
matlab |
In Progress |
Benedetto Piccoli |
| Analyzing NJ COVID-19 responses with Control theory, extending a study from earlier this year. |
Rutgers-Camden |
Sean McQuade |
Data-facing, Researcher-facing, Simulations, Tools-and-Techniques, Programming-languages-and-software-support, programming-best-practices, programming, matlab |
In Progress |
Benedetto Piccoli |
| Electrostatics of the GABA(A) receptor pore |
Rutgers University–Camden |
Galen Collier |
Researcher-facing, Domain-Specific, molecular-dynamics, namd, Programming-languages-and-software-support, programming-best-practices, scripting, programming, bash, slurm |
In Progress |
Grace Brannigan |
| Amsterdam Modeling Suite Software Usage on Penn State’s Roar Computer Clusters |
Penn State University - Altoona Campus |
Jeffrey Nucciarone |
Researcher-facing, Domain-Specific, computational-chemistry, quantum-mechanics, hpc-getting-started, Tools-and-Techniques, batch-jobs, job-sizing, scheduling, terminal-emulation-and-window-management, Systems-facing, HPC-Operations, accounts, provisioning, permissions, hw-and-sw-integration, HPC, scheduler, pbs, Cluster-support, file-transfer, putty, ssh, Management/Professional Development, Technical-Training-for-HPC, Unclassified, cyberinfrastructure, HPCs |
In Progress |
Kofi Adu |
| An optimized search algorithm for gravitational waves from post-merger remnants |
University of Rhode Island |
Gaurav Khanna |
astrophysics, hpc-getting-started, parallelism, python, gpus, HPC, conda, cuda, parallelization |
In Progress |
Robert Coyne |
| Project WiCCED ML |
University of Delaware |
Anita Schwartz |
Researcher-facing, Domain-Specific, machine-learning, docker, Programming-languages-and-software-support, programming-best-practices, python, r, Software-installation, tensorflow, tuning, spark, kubernetes, jupyterhub, hadoop |
In Progress |
Tina Callahan |
| Assembly and Taxonomic Profiling of Metagenomic Sequences using Deep Learning |
University of Rhode Island |
Gaurav Khanna |
biology, data, neural-network, Domain-Specific, AI, bioinformatics, deep-learning, machine-learning, python, Hardware, gpus |
Recruiting |
Ying Zhang |