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Projects/Engagements

Project Title Project Institution Project Owner Tags Status Project Leader
Deep convolutional neural networks (dCNN) for image segmentation, instance labeling, and tracking. University of Delaware Anita Schwartz Researcher-facing, DomainSpecific, BioInformatics, computational chemistry, Machine-Learning, visualization, Programming Languages and Software Support, scripting, programming, python, bash, HPC, slurm, SoftwareInstallation, tensorflow, debugging New and Recruiting Jeffrey Caplan
End-to-end learning of protein-protein interactions Rutgers University–Camden Galen Collier Researcher-facing, DomainSpecific, BioInformatics, computational chemistry, Machine-Learning, visualization, Programming Languages and Software Support, programming best practices, scripting, programming, python, bash, HPC, slurm, SoftwareInstallation, tensorflow, tuning, debugging New and Recruiting Guillaume Lamoureux
Model Mie scattering and light propagation through a high scattering medium using Monte Carlo simulation Southern Connecticut State University Binlin Wu data handling, Simulations, Monte Carlo, scheduling, programming, matlab In Progress Binlin Wu
Deep learning for biomedical image analysis Southern Connecticut State University Binlin Wu big data, AI, Deep-Learning, Machine-Learning, python, matlab, gpus, tensorflow New and Recruiting Binlin Wu
Optimization of Mouse Social Behavior Data Analyses Pipeline University of Delaware Anita Schwartz batch jobs, job sizing, scheduling, matlab, environment-modules, bash, unix environment, lustre, nfs, slurm, sge, putty, x11, ssh New and Recruiting Josh Neunuebel
Physical chemistry studies of environmental pollutant transformations: SIMION modeling of ion behavior in an electric field New Jersey Institute of Technology Galen Collier Researcher-facing, DomainSpecific, computational chemistry, ParticlePhysics, scripting, programming New and Recruiting Alexei Khalizov
Physical chemistry studies of environmental pollutant transformations: mass spectra analysis New Jersey Institute of Technology Galen Collier Researcher-facing, DomainSpecific, computational chemistry, ParticlePhysics, scripting, programming, matlab New and Recruiting Alexei Khalizov
Physical chemistry studies of environmental pollutant transformations: LabVIEW codes for electrostatic collection and analysis of aerosol nanoparticles New Jersey Institute of Technology Galen Collier Researcher-facing, DomainSpecific, computational chemistry, ParticlePhysics, scripting, programming New and Recruiting Alexei Khalizov
Physical chemistry studies of environmental pollutant transformations: MATLAB codes for morphological analysis of fractal soot aggregates New Jersey Institute of Technology Galen Collier Researcher-facing, DomainSpecific, computational chemistry, ParticlePhysics, scripting, programming, matlab New and Recruiting Alexei Khalizov
Parallel analysis of variants in multiple bear genomes Rutgers University–Camden Galen Collier Researcher-facing, DomainSpecific, BioInformatics New and Recruiting Andrey Grigoriev
Hybrid systems and LIFE methods for Mycobacterium tuberculosis Rutgers-Camden Sean McQuade matlab New and Recruiting Benedetto Piccoli
Electrostatics of the GABA(A) receptor pore Rutgers University–Camden Galen Collier Researcher-facing, DomainSpecific, Molecular-Dynamics, namd, Programming Languages and Software Support, programming best practices, scripting, programming, bash, slurm New and Recruiting Grace Brannigan
Amsterdam Modeling Suite Software Usage on Penn State’s Roar Computer Clusters Penn State University - Altoona Campus Jeffrey Nucciarone Researcher-facing, DomainSpecific, computational chemistry, Quantum-Mechanics, HPC Getting Started, Tools/Techniques, batch jobs, job sizing, scheduling, terminal emulation/window management, Systems-facing, hpc operations, accounts, provisioning, permissions, hw/sw integration, HPC, scheduler, pbs, ClusterSupport, file-transfer, putty, ssh, Management/Professional Development, Technical Training for HPC, unclassified, CyberInfrastructure, HPCs In Progress Kofi Adu