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Projects/Engagements

Project Title Project Institution Project Owner Tags Status Project Leader
Deep convolutional neural networks (dCNN) for image segmentation, instance labeling, and tracking. University of Delaware Anita Schwartz Researcher-facing, domain-specific, machine-learning, bioinformatics, computational-chemistry, visualization, programming-languages-and-software-support, scripting, programming, python, bash, hpc, slurm, software-installation, tensorflow, debugging Finishing Up Jeffrey Caplan
Model Mie scattering and light propagation through a high scattering medium using Monte Carlo simulation Southern Connecticut State University Binlin Wu data-handling, matlab, monte-carlo, programming, scheduling, simulations Complete Binlin Wu
Deep learning for biomedical image analysis Southern Connecticut State University Binlin Wu AI, big-data, deep-learning, gpus, machine-learning, matlab, python, tensorflow Complete Binlin Wu
Optimization of Mouse Social Behavior Data Analyses Pipeline University of Delaware Anita Schwartz bash, batch-jobs, environment-modules, job-sizing, lustre, matlab, nfs, putty, scheduling, sge, slurm, ssh, unix-environment, x11 Complete Josh Neunuebel
Physical chemistry studies of environmental pollutant transformations: SIMION modeling of ion behavior in an electric field New Jersey Institute of Technology Galen Collier computational-chemistry, domain-specific, particle-physics, programming, Researcher-facing, scripting On Hold Alexei Khalizov
Parallel analysis of variants in multiple bear genomes: algorithmic solutions Rutgers University–Camden Galen Collier Data-Facing, bioinformatics, domain-specific, Researcher-facing Finishing Up Andrey Grigoriev
Hybrid systems and LIFE methods for Mycobacterium tuberculosis Rutgers-Camden Sean McQuade matlab Finishing Up Benedetto Piccoli
Analyzing NJ COVID-19 responses with Control theory, extending a study from earlier this year. Rutgers-Camden Sean McQuade Data-facing, matlab, programming, programming-best-practices, programming-languages-and-software-support, Researcher-facing, simulations, tools-and-techniques Finishing Up Benedetto Piccoli
Electrostatics of the GABA(A) receptor pore Rutgers University–Camden Galen Collier bash, domain-specific, molecular-dynamics, namd, programming, programming-best-practices, programming-languages-and-software-support, Researcher-facing, scripting, slurm In Progress Grace Brannigan
Amsterdam Modeling Suite Software Usage on Penn State’s Roar Computer Clusters Penn State University - Altoona Campus Jeffrey Nucciarone account, batch-jobs, cluster-support, computational-chemistry, cyberinfrastructure, domain-specific, file-transfer, hpc, hpc-getting-started, hpc-operations, hw-and-sw-integration, job-sizing, Management/Professional Development, pbs, permissions, provisioning, putty, quantum-mechanics, Researcher-facing, scheduler, scheduling, ssh, Systems-facing, technical-training-for-hpc, terminal-emulation-and-window-management, tools-and-techniques, Unclassified In Progress Kofi Adu
An optimized search algorithm for gravitational waves from post-merger remnants University of Rhode Island Gaurav Khanna astrophysics, conda, cuda, gpus, hpc, hpc-getting-started, parallelism, parallelization, python Complete Robert Coyne
Project WiCCED ML University of Delaware Anita Schwartz docker, domain-specific, hadoop, jupyterhub, kubernetes, machine-learning, programming-best-practices, programming-languages-and-software-support, python, r, Researcher-facing, software-installation, spark, tensorflow, tuning Complete Tina Callahan
Assembly and Taxonomic Profiling of Metagenomic Sequences using Deep Learning University of Rhode Island Gaurav Khanna AI, bioinformatics, biology, deep-learning, domain-specific, gpus, hardware, machine-learning, neural-network, python In Progress Ying Zhang
Computational Simulation of One-Dimensional Porous Polymers The University at Albany, SUNY Jeremy Feldblyum monte-carlo, computational-chemistry, collaboration, materials-science In Progress Jeremy Feldblyum
Establish Computational Analysis Infrastructure for the CCRI 16-inch Telescope. Community College of Rhode Island Gaurav Khanna astrophysics, cyberinfrastructure, data-analysis, documentation, git, hpc, python, remote-servers, research-facilitation, scripting Finishing Up Brendan Britton
A green, open-source greater than 10B parameter language model. MIT Chris Hill Recruiting Chris Hill
High Performance Computing vs Quantum Computing for Neural Networks supporting Artificial Intelligence Pace University Avery Leider programming-for-hpc, research-computing, research-facilitation, research-grants, github, big-data, notebooks, Researcher-facing, hpc-getting-started, natural-language-processing, quantum-mechanics, machine-learning, scikit-learn, deep-learning, AI, visualization, tools-and-techniques, resources, singularity, python, research-software, hpc-cluster-architecture, hpc-operations, hpc, vectorization, jupyterhub, proposal-development, technical-training-for-hpc In Progress Charles C. Tappert
US Tax Code to Natural Language Parsable Data for Programming Languages University of Connecticut - Stamford Kaylea Nelson natural-language-processing, python, sql Recruiting Phillip Bradford
Statistical Analysis of criminal cases in the United States District Court of Puerto Rico Salve Regina University Gaurav Khanna AI, cyberinfrastructure, data-analysis, machine-learning, python, stats In Progress Carlos Paniagua
GPN Women in HPC Chapter Great Plains Network Kate Adams In Progress Christina Roberts