slurm

Resources

Title	Category	Tags	Skill Level
Cornell Virtual Workshop	Learning	slurm, cuda, globus, file-transfer, r, python, mpi, matlab, parallelism, performance-tuning	Beginner, Intermediate, Advanced, Expert

Projects

Project Title	Project Institution	Project Owner	Tags	Status
Deep convolutional neural networks (dCNN) for image segmentation, instance labeling, and tracking.	University of Delaware	Anita Schwartz	Researcher-facing, Domain-Specific, bioinformatics, computational-chemistry, machine-learning, visualization, Programming-languages-and-software-support, scripting, programming, python, bash, HPC, slurm, Software-installation, tensorflow, debugging	In Progress
End-to-end learning of protein-protein interactions	Rutgers University–Camden	Galen Collier	Researcher-facing, Domain-Specific, bioinformatics, computational-chemistry, machine-learning, visualization, Programming-languages-and-software-support, programming-best-practices, scripting, programming, python, bash, HPC, slurm, Software-installation, tensorflow, tuning, debugging	In Progress
Optimization of Mouse Social Behavior Data Analyses Pipeline	University of Delaware	Anita Schwartz	batch-jobs, job-sizing, scheduling, matlab, environment-modules, bash, unix-environment, lustre, nfs, slurm, sge, putty, x11, ssh	In Progress
Electrostatics of the GABA(A) receptor pore	Rutgers University–Camden	Galen Collier	Researcher-facing, Domain-Specific, molecular-dynamics, namd, Programming-languages-and-software-support, programming-best-practices, scripting, programming, bash, slurm	In Progress

Student Facilitators

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Mentors and Regional Facilitators

Name	Region	Skills	Interests
Andy Monaghan	RMACC	bash batch-jobs compiling conda containers globus hpc-getting-started job-sizing more...
Brian Haymore	RMACC	accounts acls backup bash batch-jobs ceph cgroups cifs more...	accounts acls archive aws azure backup bash batch-jobs more...
Torey Battelle	MINES, RMACC	accounts compiling computational-chemistry dependencies gpfs hpc-getting-started HPCs molecular-dynamics more...
Kaylea Nelson	CAREERS	astrophysics bash batch-jobs Cluster-support compiling conda debugging environment-modules more...	acls astrophysics bash batch-jobs c++ compiling conda Data-facing more...
Chris Carothers	CAREERS	cpus cuda file-system gpus hardware-architecture hpc-getting-started machine-learning mpi more...
Andrew Sherman	CAREERS	compiling cuda debugging distributed-computing HPC hpc-getting-started matlab mpi more...
Bill Conn	Great Plains	bash batch-jobs compiling conda nfs slurm unix-environment
Carrie Brown	Great Plains	bash batch-jobs conda condor containers data-wrangling distributed-computing fastx more...
Keri Toksu	Northeast	bash batch-jobs hpc-getting-started natural-language-processing open-on-demand programming Programming-languages-and-software-support python more...
Jeff Dusenberry	Northeast	batch-jobs cpus cyberinfrastructure debugging gpus mpi parallelism sge more...
Juan Vanegas	Northeast	bash batch-jobs bioinformatics compiling conda environment-modules HPC hpc-cluster-build more...
Scott Yockel	Northeast	scheduling slurm storage unix-environment
Shawn Doughty	Northeast	accounts aws batch-jobs cgroups containers cpus desktops fastx more...
Spencer Pruitt	Northeast	batch-jobs computational-chemistry cpus debugging distributed-computing Hardware HPC-Operations mpi more...
Shawn Sivy	CAREERS	acls backup bash batch-jobs cifs compiling containers cpus more...

Researchers and Educators

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Blog Entries

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