github

Mentors and Regional Facilitators

Name	Region	Skills	Interests
Rob Harbert	Northeast	anaconda array-job batch-jobs big-data bioinformatics biology cluster distributed-computing more...
Georgia Stuart	TRECIS	c data-analysis github jekyll monte-carlo notebooks random-numbers simulations more...
Mike Renfro	Campus Champions	administering-hpc anaconda bash conda environment-modules fortran git github more...
Derek Strong	Campus Champions	bash batch-jobs containers data-management data-transfer documentation github lmod more...
Jacob Fosso Tande	Campus Champions	administering-hpc azure bash c++ cloud cluster-support community-outreach compiling more...
Kali McLennan	Campus Champions, Great Plains	acls array-job bash cgroups cifs cloud cluster-management cluster-support more...
Carrie Brown	CAREERS	bioinformatics cleanup community-outreach data-wrangling distributed-computing genomics github github-pages more...	hpc-getting-started htc
Jason Wells		administering-hpc api bash batch-jobs biology cloud cluster cluster-management more...
Jordan Hayes	Campus Champions	acls administering-hpc amber anaconda api array-job atlas aws more...
Swabir Silayi	Campus Champions	amber anaconda array-job bash batch-jobs benchmarking c c++ more...	administering-hpc cloud cluster-management collaboration
Ibrahim Sheikh	CAREERS	benchmarking blackhole cloud community-outreach debugging deep-learning dependencies desktop more...	backup benchmarking blackhole community-outreach computational-chemistry connection deep-learning desktop more...

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Affinity Groups

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Users

Name	Roles	Skills	Interests
Kenneth Acosta	student facilitator	bash bioinformatics biology conda genomics github pip python more...	batch-jobs cloud cluster cluster-management cluster-support data-management data-transfer distributed-computing more...
Carlos Paniagua	researcher/educator	cleanup data-analysis data-lifecycle data-wrangling file-formats git github image-processing more...
Younes Shafter	student facilitator	anaconda big-data bioinformatics computational-chemistry ddocent deep-learning fastx gatk more...	hpc
John Acheampong	student facilitator	anatomy biology conda github notebooks programming-best-practices python software-installation more...
Iryna Chornopys	student facilitator	anaconda cleanup data-analysis github notebooks python sql visualization more...
Krutika Patel	student facilitator	ai anaconda bash github java putty python r more...
Suhong Li	researcher/educator	anaconda big-data cleanup data-analysis data-wrangling github machine-learning natural-language-processing more...
Carrie Brown	mentor steering committee	bioinformatics cleanup community-outreach data-wrangling distributed-computing genomics github github-pages more...	hpc-getting-started htc
Gabrielle Martinez	student facilitator	api data-analysis github github-pages programming r stata	ai big-data data-reproducibility geographic-information-system image-processing julia machine-learning matlab more...
Madhukara Keku…	student facilitator	ai anaconda api aws bash big-data c conda more...
Eren Ada	student facilitator	anaconda array-job bash big-data bioinformatics biology collaboration community-outreach more...
Ritesh Bachhar	student facilitator	anaconda astrophysics c fortran git github machine-learning mathematica more...	api astrophysics bash batch-jobs blackhole c++ cloud compiling more...
Emma Strand	student facilitator	anaconda archiving bash big-data bioinformatics biology cluster community-outreach more...
Nihar Biradar	student facilitator	api c++ github internet java open-source programming programming-languages more...
Xiaoluo Jiao	student facilitator	bioinformatics biology cleanup data-management data-reproducibility data-science-support data-wrangling genomics more...	python sql
Qingdou Han	student facilitator	bash collaboration data-analysis data-reproducibility data-science-support data-wrangling git github more...
Ibrahim Sheikh	student facilitator mentor regional facilitator researcher/educator rcf	benchmarking blackhole cloud community-outreach debugging deep-learning dependencies desktop more...	backup benchmarking blackhole community-outreach computational-chemistry connection deep-learning desktop more...
Seth Rosen	student facilitator	bash big-data c compiling data-analysis debugging deep-learning documentation more...
Jaivik Patel	student facilitator	bash c c++ compiling debugging git github internet more...
Joseph Antonucci	student facilitator	ai c c++ cleanup compiling cuda deep-learning git more...	ai astrophysics blackhole c c++ compiling cuda cybersecurity more...
Gregory Ezike	student facilitator	bash biology c c++ cloud github java mpi more...
Jaini Bhavsar	student facilitator	anaconda bash conda documentation github jupyterhub machine-learning python more...

Resources

Title	Category Sort descending	Tags	Skill Level
Git Branching Workflow and Maneuvers	Learning	github, git	Beginner, Intermediate, Advanced
Version control with Git	Learning	version-control, github, git	Beginner

Projects

Project Title	Project Institution	Project Owner	Tags	Status
Calculation of Polymer Hydrophobicity	Penn State-New Kensington	Rob Mathers	cleanup, git, github, optimization, python, research-software	In Progress
High throughput Python pipeline to identify Horizontal Gene Transfer	Cabrini University	Vinayak Mathur	bioinformatics, biology, data-wrangling, genomics, github, python, workflow	In Progress
High Performance Computing vs Quantum Computing for Neural Networks supporting Artificial Intelligence	Pace University	Avery Leider	ai, big-data, deep-learning, github, hpc, hpc-cluster-architecture, hpc-getting-started, hpc-operations, jupyterhub, machine-learning, natural-language-processing, notebooks, programming-for-hpc, proposal-development, python, quantum-mechanics, research-computing, research-facilitation, research-grants, research-software, researcher-facing, resources, scikit-learn, singularity, technical-training-for-hpc, tools-and-techniques, vectorization, visualization	Complete

Blog Entries

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