github

Mentors and Regional Facilitators

Name	Region	Skills	Interests
Adam Carlson	Campus Champions	archiving backup bash cluster-management cluster-support cpu-architecture data-lifecycle data-management more...
Alyssa Pivirotto	ACCESS CSSN, Campus Champions	bash bioinformatics biology conda data-analysis data-science genomics github more...	arcgis machine-learning
Devin Bayly	ACCESS CSSN, Campus Champions, CCMNet	ACCESS-account adding-users affinity-group allocations-extension allocations-proposal batch-jobs community-outreach computer-graphics more...	ACCESS ACCESS-credits affinity-group allocations-extension computer-graphics computer-vision containers cuda more...
Brandon Biggs	OnDemand	administering-hpc ai anaconda ansible api artificial-intelligence authentication bash more...
Carrie Brown	CAREERS, ACCESS CSSN, CCMNet	bioinformatics cleanup community-outreach data-wrangling distributed-computing genomics github github-pages more...
Craig Gross	Campus Champions, CCMNet	bash c c++ conda data-analysis data-science git github more...
Cody Stevens	Campus Champions, CCMNet	administering-hpc anaconda archiving aws backup bash batch-jobs benchmarking more...
Bala Desinghu	ACCESS CSSN, Campus Champions, CAREERS, Northeast	ai anaconda api bash batch-jobs benchmarking big-data bioinformatics more...	affinity-group ai allocations-proposal amber anaconda archiving backup bash more...
Daniel Morales	Campus Champions	ACCESS ACCESS-allocations ACCESS-credits adding-users allocation-management anaconda bash batch-jobs more...	ACCESS ACCESS-allocations allocation-management bioinformatics biology community-outreach conda deep-learning more...
Deborah Penchoff	Campus Champions	abstract ACCESS ACCESS-account adding-users affiliations ai allocation-management allocation-time more...
Derek Strong	Campus Champions	bash batch-jobs containers data-management data-transfer github lmod modules more...
Edwin Posada	Campus Champions	administering-hpc bash batch-jobs benchmarking c c++ cluster-management cluster-support more...
Fernando Garzon	ACCESS CSSN	abstract ai aws bash batch-jobs big-data citation containers more...	ai aws azure bash batch-jobs big-data c c++ more...
Feseha Abebe-Akele	CCMNet	abstract ACCESS ACCESS-account ACCESS-allocations ACCESS-credits ACCESS-website account adding-users more...
Georgia Stuart	TRECIS	c data-analysis github jekyll monte-carlo random-numbers
Ibrahim Sheikh	CAREERS	benchmarking community-outreach debugging deep-learning dependencies encryption gis git more...	backup benchmarking community-outreach computational-chemistry deep-learning file-formats gamess gis more...
Yu-Chieh Chi	Campus Champions	anaconda bash batch-jobs c c++ computational-chemistry containers cuda more...
Jacob Fosso Tande	ACCESS CSSN, Campus Champions, CCMNet	abstract ACCESS ACCESS-allocations administering-hpc aws azure bash benchmarking more...	administering-hpc cgroups cluster cluster-management composable-systems cyverse data-compliance data-security more...
Juan Jose Garc…	ACCESS CSSN	bash c++ git github r software-carpentry tmux version-control	ACCESS-website cuda generative-ai nlp
Jordan Hayes	Campus Champions	acls administering-hpc amber anaconda api atlas aws bash more...
Jonathan Komperda	Campus Champions	ACCESS ACCESS-allocations administering-hpc artificial-intelligence benchmarking c c++ centos more...
Jason Wells	ACCESS CSSN, Campus Champions	administering-hpc api bash batch-jobs biology cluster-management cluster-support comsol more...
Kali McLennan	Campus Champions, Great Plains	acls bash cgroups cifs cluster-management cluster-support compiling conda more...
Kyle Krick	ACCESS CSSN, Campus Champions	api azure cilogon containers docker git github github-pages more...	ACCESS-account ACCESS-credits ACCESS-website administering-hpc ai allocation-management aws cilogon more...
Od Odbadrakh	ACCESS CSSN	ACCESS ACCESS-account ACCESS-allocations account affinity-group ai archiving bash more...	ACCESS account ai archiving bash batch-jobs benchmarking c more...
shuai liu	ACCESS CSSN	ai anaconda azure big-data bioinformatics biology containers data-analysis more...
Mohsen Ahmadkhani	CCMNet, ACCESS CSSN	ai bash batch-jobs big-data centos computer-vision conda containers more...	ACCESS administering-hpc ai allocation-management api arcgis aws azure more...
Mattie Niznik	Campus Champions	anaconda bash batch-jobs cluster-support compiling conda data-science docker more...	data-analysis data-science generative-ai git github github-pages html llm more...
Michael Puerrer	Campus Champions, Northeast	astrophysics bash benchmarking c c++ conda containers cuda more...
Maryam Taeb		abstract ai anaconda bash big-data community-outreach conda cybersecurity more...	abstract ai anaconda api bash big-data c citation more...
Lev Gorenstein	CCMNet	administering-hpc anaconda anvil archiving backup bash batch-jobs cluster more...
Paul Rulis	Campus Champions	abstract affiliations ai bash batch-jobs c c++ checkpoint more...	abstract affiliations ai amber atlas bash batch-jobs benchmarking more...
Rebecca Belshe	Campus Champions, CCMNet	abstract ACCESS ACCESS-account ACCESS-allocations ACCESS-credits ACCESS-website affiliations affinity-group more...	astrophysics biology data-science genomics materials-science oceanography psychology
Mike Renfro	Campus Champions, CCMNet	administering-hpc anaconda bash conda environment-modules fortran git github more...
Rob Harbert	Northeast	anaconda batch-jobs big-data bioinformatics biology distributed-computing genomics gis more...
Amy Roberts	Campus Champions	acls bash containers dependencies docker git github open-storage-network more...
Ruben Lara	Campus Champions	administering-hpc backup bash cluster-management cluster-support cmmc cpu-architecture cui more...
Xiaoqin Huang	ACCESS CSSN	ACCESS-account ACCESS-credits adding-users affinity-group allocations-extension allocations-proposal amber anaconda more...	ACCESS-credits ACCESS-website adding-users affinity-group allocations-extension allocations-proposal amber anaconda more...
Swabir Silayi	ACCESS CSSN, CCMNet, Campus Champions	amber anaconda bash batch-jobs benchmarking c c++ checkpoint more...	administering-hpc cluster-management
Suhong Li	CAREERS, ACCESS CSSN	anaconda big-data cleanup data-analysis data-wrangling github machine-learning natural-language-processing more...
Soham Pal	ACCESS CSSN, Campus Champions, CCMNet	bash c++ conda file-formats git github github-pages jupyterhub more...
Sumit Saluja	Campus Champions	administering-hpc anaconda aws azure backup batch-jobs c c++ more...
Sathish Srinivasan	ACCESS CSSN	acls administering-hpc ai ansible bash batch-jobs benchmarking big-data more...	artificial-intelligence bioinformatics biology computational-chemistry computer-science data-science genomics mathematics more...
Tyler Burkett	Kentucky	aws bash c c++ containers cuda git github more...	networking quantum-mechanics
Timothy Middelkoop	ACCESS CSSN, Campus Champions, CCMNet, Great Plains	abstract ACCESS-allocations administering-hpc affinity-group ansible api aws azure more...	abstract ACCESS ACCESS-allocations ACCESS-credits administering-hpc ansible anvil api more...
Thomas Pranzatelli		bash batch-jobs bioinformatics biology c c++ cloud-computing cluster-management more...	bash biology cuda deep-learning distributed-computing gpu IO-issue julia more...
Xiaoge Wang	Campus Champions	bash batch-jobs benchmarking c c++ centos checkpoint compiling more...
William Lai	ACCESS CSSN	administering-hpc ai anaconda archiving backup bash bioinformatics biology more...	administering-hpc ai archiving bash benchmarking big-data bioinformatics biology more...

Users

Name	Roles	Skills	Interests
Amin Sepehri	student facilitator	data-analysis fluid-dynamics github julia linear-programming machine-learning matlab optimization more...	machine-learning supervised-learning unsupervised-learning
Carrie Brown	mentor steering committee	bioinformatics cleanup community-outreach data-wrangling distributed-computing genomics github github-pages more...
Joseph Antonucci	student facilitator	ai c c++ cleanup compiling cuda deep-learning git more...	ai astrophysics c c++ compiling cuda cybersecurity deep-learning more...
Carlos Paniagua	researcher/educator	cleanup data-analysis data-lifecycle data-wrangling file-formats git github image-processing more...
Bala Desinghu	mentor researcher/educator rcf	ai anaconda api bash batch-jobs benchmarking big-data bioinformatics more...	affinity-group ai allocations-proposal amber anaconda archiving backup bash more...
Emma Strand	student facilitator	anaconda archiving bash big-data bioinformatics biology community-outreach data-analysis more...
Eren Ada	student facilitator	anaconda bash big-data bioinformatics biology community-outreach compiling dependencies more...
Gabrielle Martinez	student facilitator	api data-analysis data-reproducibility data-science gis github github-pages programming more...	ai big-data data-reproducibility gis image-processing julia machine-learning matlab more...
Gregory Ezike	student facilitator	bash biology c c++ github java mpi programming more...
Ibrahim Sheikh	student facilitator mentor regional facilitator researcher/educator rcf	benchmarking community-outreach debugging deep-learning dependencies encryption gis git more...	backup benchmarking community-outreach computational-chemistry deep-learning file-formats gamess gis more...
Jaini Bhavsar	student facilitator	anaconda bash conda github jupyterhub machine-learning python scripting more...
Jaivik Patel	student facilitator	bash c c++ compiling debugging git github java more...
John Acheampong	student facilitator	biology conda github programming-best-practices python software-installation
Kenneth Acosta	student facilitator	bash bioinformatics biology conda genomics github pip python more...	batch-jobs cluster-management cluster-support data-management data-transfer distributed-computing programming-best-practices scheduling
Krutika Patel	student facilitator	ai anaconda bash github java putty python r more...
Lenore Martin	researcher/educator	administering-hpc amber anaconda backup bash bioinformatics biology charmm more...	administering-hpc ai amber anaconda bioinformatics biology charmm community-outreach more...
Xiaoluo Jiao	student facilitator	bioinformatics biology cleanup data-management data-reproducibility data-wrangling genomics git more...	python sql
Matt Ferguson	researcher/educator	ACCESS ai anaconda bash bioinformatics biology c charmm more...	ACCESS ACCESS-account ACCESS-allocations ACCESS-credits ACCESS-website ai amber anaconda more...
Madhukara Keku…	student facilitator	ai anaconda api aws bash big-data c conda more...
Nihar Biradar	student facilitator	api c++ cleanup git github java matlab memory more...	ai astrophysics aws batch-jobs cloud-open-source cloud-storage cpu-architecture cybersecurity more...
Qingdou Han	student facilitator	bash data-analysis data-reproducibility data-wrangling git github github-pages machine-learning more...
Parameshwaran …	student facilitator	abaqus anaconda api batch-jobs comsol data-science deep-learning finite-element-analysis more...	abaqus bash batch-jobs big-data comsol data-science deep-learning environment-modules more...
Ritesh Bachhar	student facilitator	anaconda astrophysics c fortran git github machine-learning mathematica more...	api astrophysics bash batch-jobs c++ compiling cpu-architecture cuda more...
Sander Cohen-Janes	student facilitator	anaconda bash benchmarking dft gaussian github mathematica python more...	c git python r xsede
Suhong Li	mentor researcher/educator	anaconda big-data cleanup data-analysis data-wrangling github machine-learning natural-language-processing more...
Seth Rosen	student facilitator	bash big-data c compiling data-analysis debugging deep-learning encryption more...

Projects

Project Title	Project Institution	Project Owner	Tags	Status
High throughput Python pipeline to identify Horizontal Gene Transfer	Cabrini University	Vinayak Mathur	bioinformatics, biology, data-wrangling, genomics, github, python, workflow	Halted
Calculation of Polymer Hydrophobicity	Penn State-New Kensington	Rob Mathers	cleanup, git, github, optimization, python	Complete
High Performance Computing vs Quantum Computing for Neural Networks supporting Artificial Intelligence	Pace University	Avery Leider	ai, big-data, deep-learning, github, hpc-cluster-architecture, hpc-operations, jupyterhub, machine-learning, natural-language-processing, proposal-development, python, quantum-mechanics, research-facilitation, research-grants, resources, scikit-learn, singularity, vectorization	Complete

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Upcoming Events & Trainings

Title	Date
COMPLECS: Using Regular Expressions with Linux Tools	5/29/25
COMPLECS: Using Regular Expressions with Linux Tools	5/29/25
COMPLECS: Using Regular Expressions with Linux Tools	5/29/25

Topics from Ask.CI

Knowledge Base Resources

Title	Category	Tags	Skill Level
Awesome Jupyter Widgets (for building interactive scientific workflows or science gateway tools)	Learning	ai, computer-graphics, plotting, visualization, big-data, data-analysis, deep-learning, image-processing, machine-learning, monte-carlo, neural-networks, data-sharing, data-lifecycle, data-management, data-management-software, data-reproducibility, github, astrophysics, data-science, novel-accelerators, computational-chemistry, genomics, materials-science, gravitational-waves, oceanography, particle-physics, physiology, psychology, quantum-computing, quantum-mechanics, biology, open-ondemand, science-gateway, c++, jupyterhub, python	Beginner, Intermediate, Advanced
Benchmarking with a cross-platform open-source flow solver, PyFR	Tool	finite-element-analysis, benchmarking, parallelization, github, fluid-dynamics, openmpi, c++, cuda, mpi	Intermediate
Building the ArduPilot environment for Linux	Docs	profiling, data-transfer, github, github-pages, cpu-architecture, bash, environment-modules, git, modules, os, permissions, ssh, vim	Beginner