programming-best-practices

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Project Title	Project Institution	Project Owner	Tags	Status
End-to-end learning of protein-protein interactions	Rutgers University–Camden	Galen Collier	Researcher-facing, Domain-Specific, bioinformatics, computational-chemistry, machine-learning, visualization, Programming-languages-and-software-support, programming-best-practices, scripting, programming, python, bash, HPC, slurm, Software-installation, tensorflow, tuning, debugging	In Progress
Analyzing NJ COVID-19 responses with Control theory, extending a study from earlier this year.	Rutgers-Camden	Sean McQuade	Data-facing, Researcher-facing, Simulations, Tools-and-Techniques, Programming-languages-and-software-support, programming-best-practices, programming, matlab	In Progress
Electrostatics of the GABA(A) receptor pore	Rutgers University–Camden	Galen Collier	Researcher-facing, Domain-Specific, molecular-dynamics, namd, Programming-languages-and-software-support, programming-best-practices, scripting, programming, bash, slurm	In Progress
Project WiCCED ML	University of Delaware	Anita Schwartz	Researcher-facing, Domain-Specific, machine-learning, docker, Programming-languages-and-software-support, programming-best-practices, python, r, Software-installation, tensorflow, tuning, spark, kubernetes, jupyterhub, hadoop	In Progress

Name	Skills	Interests
Alex Flosdorf	bash c++ programming programming-best-practices Programming-languages-and-software-support python
Dylan Le	bash c++ monte-carlo mpi programming programming-best-practices Programming-languages-and-software-support python more...	AI big-data cloud-commercial cloud-open-source Cluster-support cybersecurity deep-learning HPC more...
Richard Le	bash c++ compiling debugging parallelism pip programming-best-practices Programming-languages-and-software-support more...	AI big-data deep-learning image-processing machine-learning natural-language-processing
Igor Nachevnik	accounts acls archive azure backup bash batch-jobs cifs more...	aws azure big-data Cloud/vm compiling conda containers cyberinfrastructure more...

Name	Region	Skills	Interests
Scott Valcourt	Northeast	accounts bash batch-jobs big-data compiling cyberinfrastructure data-handling data-lifecycle more...
Adrian Del Maestro	Northeast	batch-jobs c++ compiling cpus cyberinfrastructure Data-Management debugging gpus more...
Katia Bulekova	Northeast	batch-jobs big-data c++ cuda data-handling data-wrangling programming-best-practices Programming-languages-and-software-support more...
Martin Cuma	RMACC	bash batch-jobs c++ compiling debugging distributed-computing environment-modules job-sizing more...	bash batch-jobs c++ compiling comsol conda containers cpus more...
Kaylea Nelson	CAREERS	astrophysics bash batch-jobs Cluster-support compiling conda debugging environment-modules more...	acls astrophysics bash batch-jobs c++ compiling conda Data-facing more...
Grant Scott	Great Plains	AI aws bash big-data c++ Cloud/vm compiling containers more...	Cloud/vm Data-facing Management/Professional Development Researcher-facing
Jeffrey Nucciarone	CAREERS	archive bash big-data Cluster-support Community-Outreach cybersecurity data-handling deep-learning more...
Brian Gregor	Northeast	big-data cpus data-handling debugging gpus Hardware hardware-architecture job-sizing more...
David Oury	Northeast	programming programming-best-practices python r tensorflow unix-environment
Shawn Doughty	Northeast	accounts aws batch-jobs cgroups containers cpus desktops fastx more...

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