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End-to-end learning of protein-protein interactions
Researcher-facing ,
DomainSpecific ,
BioInformatics ,
computational chemistry ,
Machine-Learning ,
visualization ,
Programming Languages and Software Support ,
programming best practices ,
scripting ,
programming ,
python ,
bash ,
HPC ,
slurm ,
SoftwareInstallation ,
tensorflow ,
tuning ,
debugging
Parallel analysis of variants in multiple bear genomes
Hybrid systems and LIFE methods for Mycobacterium tuberculosis
Physical chemistry studies of environmental pollutant transformations: SIMION modeling of ion behavior in an electric field
Physical chemistry studies of environmental pollutant transformations: mass spectra analysis
Physical chemistry studies of environmental pollutant transformations: LabVIEW codes for electrostatic collection and analysis of aerosol nanoparticles
Physical chemistry studies of environmental pollutant transformations: MATLAB codes for morphological analysis of fractal soot aggregates
Project WiCCED ML
Researcher-facing ,
DomainSpecific ,
Machine-Learning ,
docker ,
Programming Languages and Software Support ,
programming best practices ,
python ,
r ,
SoftwareInstallation ,
tensorflow ,
tuning ,
spark ,
kubernetes ,
jupyterhub ,
hadoop
Deep convolutional neural networks (dCNN) for image segmentation, instance labeling, and tracking.
Researcher-facing ,
DomainSpecific ,
BioInformatics ,
computational chemistry ,
Machine-Learning ,
visualization ,
Programming Languages and Software Support ,
scripting ,
programming ,
python ,
bash ,
HPC ,
slurm ,
SoftwareInstallation ,
tensorflow ,
debugging
Model Mie scattering and light propagation through a high scattering medium using Monte Carlo simulation
Deep learning for biomedical image analysis
Optimization of Mouse Social Behavior Data Analyses Pipeline
batch jobs ,
job sizing ,
scheduling ,
matlab ,
environment-modules ,
bash ,
unix environment ,
lustre ,
nfs ,
slurm ,
sge ,
putty ,
x11 ,
ssh
Analyzing NJ COVID-19 responses with Control theory, extending a study from earlier this year.
Electrostatics of the GABA(A) receptor pore
Amsterdam Modeling Suite Software Usage on Penn State’s Roar Computer Clusters
Researcher-facing ,
DomainSpecific ,
computational chemistry ,
Quantum-Mechanics ,
HPC Getting Started ,
Tools/Techniques ,
batch jobs ,
job sizing ,
scheduling ,
terminal emulation/window management ,
Systems-facing ,
hpc operations ,
accounts ,
provisioning ,
permissions ,
hw/sw integration ,
HPC ,
scheduler ,
pbs ,
ClusterSupport ,
file-transfer ,
putty ,
ssh ,
Management/Professional Development ,
Technical Training for HPC ,
unclassified ,
CyberInfrastructure ,
HPCs
An optimized search algorithm for gravitational waves from post-merger remnants
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