software-installation

Mentors and Regional Facilitators

Name	Region	Skills	Interests
Andrew Fullard	Campus Champions	astrophysics batch-jobs conda data-analysis fortran git jupyterhub machine-learning more...	big-data community-outreach cuda data-reproducibility easybuild machine-learning
Andrew Monaghan	ACCESS CSSN	bash batch-jobs centos conda containers data-transfer docker git more...	anaconda bash conda containers docker git openstack scripting more...
Alexander Pacheco		anaconda bash batch-jobs compiling computational-chemistry conda condo fortran more...
Anita Schwartz	Campus Champions	bash batch-jobs cluster-support containers data-management distributed-computing environment-modules file-transfer more...
Andrew Sherman	ACCESS CSSN, Campus Champions, CAREERS	c compiling cuda debugging distributed-computing fortran matlab mpi more...	c cuda finite-element-analysis fortran git github globus matlab more...
Al Tucker	Campus Champions	administering-hpc ansible authentication backup bash centos configuration-automation cybersecurity more...	administering-hpc containers cybersecurity docker hpc-cluster-build hpc-operations hpc-tools python more...
Kevin Brandt	Campus Champions, Great Plains, CCMNet	ACCESS ACCESS-account ACCESS-allocations ACCESS-website account affinity-group ai allocation-users more...	checkpoint cilogon cloud-commercial data-management-software data-wrangling image-processing publication-database pytorch more...
Brian Haymore	Campus Champions, RMACC	acls backup bash batch-jobs ceph cgroups cifs cloud-storage more...	acls archiving aws azure backup bash batch-jobs ceph more...
Kevin Bryan	Campus Champions	acls bash c c++ cluster-management compiling conda debugging more...	archiving data-transfer deep-learning professional-development
Charles Forsyth	Campus Champions	acls administering-hpc anaconda aws backup bash batch-jobs cgroups more...	administering-hpc management
Christopher Bl…	Campus Champions	anaconda aws azure bash benchmarking c c++ cloud-commercial more...
Chad Julius	Campus Champions, Great Plains	administering-hpc cluster-management file-transfer globus hpc-operations hpc-storage open-ondemand slurm more...
Cody Stevens	Campus Champions, CCMNet	administering-hpc anaconda archiving aws backup bash batch-jobs benchmarking more...
Bala Desinghu	ACCESS CSSN, Campus Champions, CAREERS, Northeast	ai anaconda api bash batch-jobs benchmarking big-data bioinformatics more...	affinity-group ai allocations-proposal amber anaconda archiving backup bash more...
Derek Strong	Campus Champions	bash batch-jobs containers data-management data-transfer github lmod modules more...
Fernando Garzon	ACCESS CSSN	abstract ai aws bash batch-jobs big-data citation containers more...	ai aws azure bash batch-jobs big-data c c++ more...
Feseha Abebe-Akele	CCMNet	abstract ACCESS ACCESS-account ACCESS-allocations ACCESS-credits ACCESS-website account adding-users more...
Galen Collier	Campus Champions, Northeast	cluster-support professional-development software-installation unix-environment
Gaurav Khanna	Campus Champions, CAREERS, Northeast	astrophysics bash batch-jobs c++ cluster-support compiling cuda dependencies more...	astrophysics c c++ cuda distributed-computing fortran git hardware more...
Ibrahim Sheikh	CAREERS	benchmarking community-outreach debugging deep-learning dependencies encryption gis git more...	backup benchmarking community-outreach computational-chemistry deep-learning file-formats gamess gis more...
Iman Rahbari	Campus Champions, ACCESS CSSN	bash comsol data-analysis fluid-dynamics fortran machine-learning matlab modules more...	abaqus ai anvil aws bash batch-jobs bridges-2 comsol more...
Jeff Falgout	Campus Champions, RMACC	administering-hpc backup bash batch-jobs benchmarking cgroups cluster-management cluster-support more...	administering-hpc benchmarking big-data ceph cloud-storage cluster-management data-access-protocols data-transfer more...
Jacob Fosso Tande	Campus Champions	administering-hpc azure bash c++ cluster-support community-outreach compiling computational-chemistry more...
Jordan Hayes	Campus Champions	acls administering-hpc amber anaconda api atlas aws bash more...
Jacob Pessin	Northeast	aws bash batch-jobs big-data bioinformatics cloud-storage cluster-support cyverse more...
Kali McLennan	Campus Champions, Great Plains	acls bash cgroups cifs cluster-management cluster-support compiling conda more...
Katherine Nelson	Campus Champions, CAREERS, ACCESS CSSN	astrophysics bash batch-jobs cluster-support compiling conda debugging environment-modules more...	acls astrophysics bash batch-jobs c++ compiling conda debugging more...
Od Odbadrakh	ACCESS CSSN	ACCESS ACCESS-account ACCESS-allocations account affinity-group ai archiving bash more...	ACCESS account ai archiving bash batch-jobs benchmarking c more...
Marina Kraeva	Campus Champions	benchmarking debugging hpc-cluster-architecture hpc-operations parallelization research-facilitation slurm software-installation more...
shuai liu	ACCESS CSSN	ai anaconda azure big-data bioinformatics biology containers data-analysis more...
Mohammadreza H…	Campus Champions	fortran mpi openmp optimization programming project-management proposal-development research-grants more...
Michael Puerrer	Campus Champions, Northeast	astrophysics bash benchmarking c c++ conda containers cuda more...
Nicholas Danes	Campus Champions, MINES	anaconda biology compiling cpu-bound distributed-computing fluid-dynamics fortran job-array more...	ai aws azure benchmarking big-data c c++ deep-learning more...
Nick Dusek	Campus Champions	administering-hpc anaconda bash batch-jobs bioinformatics compiling containers data-transfer more...
Justin Oelgoetz	Campus Champions, CCMNet	abstract affiliations astrophysics bash benchmarking c c++ citation more...	administering-hpc ai amber astrophysics benchmarking c c++ charmm more...
Lev Gorenstein	CCMNet	administering-hpc anaconda anvil archiving backup bash batch-jobs cluster more...
Paul Rulis	Campus Champions	abstract affiliations ai bash batch-jobs c c++ checkpoint more...	abstract affiliations ai amber atlas bash batch-jobs benchmarking more...
Ron Rahaman	Campus Champions	anaconda bash batch-jobs benchmarking c c++ cluster-support compiling more...	containers cpu-architecture dependencies documentation gpu hpc-arch-and-perf programming-best-practices software-carpentry more...
Sean Anderson	Campus Champions, CCMNet	administering-hpc anaconda bash batch-jobs benchmarking cluster-support community-outreach compiling more...
Xiaoqin Huang	ACCESS CSSN	ACCESS-account ACCESS-credits adding-users affinity-group allocations-extension allocations-proposal amber anaconda more...	ACCESS-credits ACCESS-website adding-users affinity-group allocations-extension allocations-proposal amber anaconda more...
Shaohao Chen	Northeast	ai bash batch-jobs compiling containers cuda debugging deep-learning more...
Shubha Kope	Campus Champions	aws benchmarking kubernetes lmod login password programming-best-practices putty more...	ACCESS-website administering-hpc ai archiving authentication aws backup bash more...
Sumit Saluja	Campus Champions	administering-hpc anaconda aws azure backup batch-jobs c c++ more...
Shawn Sivy	Campus Champions, CAREERS	acls backup bash batch-jobs cifs compiling containers cuda more...	administering-hpc amber ansible astrophysics authentication backup bash biology more...
Scott Valcourt	Northeast, Campus Champions	bash batch-jobs big-data compiling data-lifecycle data-management distributed-computing doi more...
Timothy Middelkoop	ACCESS CSSN, Campus Champions, CCMNet, Great Plains	abstract ACCESS-allocations administering-hpc affinity-group ansible api aws azure more...	abstract ACCESS ACCESS-allocations ACCESS-credits administering-hpc ansible anvil api more...
Xiaoge Wang	Campus Champions	bash batch-jobs benchmarking c c++ centos checkpoint compiling more...
William Lai	ACCESS CSSN	administering-hpc ai anaconda archiving backup bash bioinformatics biology more...	administering-hpc ai archiving bash benchmarking big-data bioinformatics biology more...
Yun Shen	CAREERS, Northeast, ACCESS CSSN, CCMNet	big-data bioinformatics data-analysis data-science genomics open-ondemand Programming programming more...

Users

Name	Roles	Skills	Interests
Andrew Sherman	mentor rcf steering committee	c compiling cuda debugging distributed-computing fortran matlab mpi more...	c cuda finite-element-analysis fortran git github globus matlab more...
Bala Desinghu	mentor researcher/educator rcf	ai anaconda api bash batch-jobs benchmarking big-data bioinformatics more...	affinity-group ai allocations-proposal amber anaconda archiving backup bash more...
Divya Dubey	student facilitator	bash open-ondemand r software-installation ssh
Gaurav Khanna	mentor regional facilitator researcher/educator rcf steering committee	astrophysics bash batch-jobs c++ cluster-support compiling cuda dependencies more...	astrophysics c c++ cuda distributed-computing fortran git hardware more...
Ibrahim Sheikh	student facilitator mentor regional facilitator researcher/educator rcf	benchmarking community-outreach debugging deep-learning dependencies encryption gis git more...	backup benchmarking community-outreach computational-chemistry deep-learning file-formats gamess gis more...
Jaivik Patel	student facilitator	bash c c++ compiling debugging git github java more...
Juan Florentino	student facilitator	file-formats hardware python software-installation
John Acheampong	student facilitator	biology conda github programming-best-practices python software-installation
Katherine Nelson	mentor rcf steering committee	astrophysics bash batch-jobs cluster-support compiling conda debugging environment-modules more...	acls astrophysics bash batch-jobs c++ compiling conda debugging more...
Matt Ferguson	researcher/educator	ACCESS ai anaconda bash bioinformatics biology c charmm more...	ACCESS ACCESS-account ACCESS-allocations ACCESS-credits ACCESS-website ai amber anaconda more...
Parameshwaran …	student facilitator	abaqus anaconda api batch-jobs comsol data-science deep-learning finite-element-analysis more...	abaqus bash batch-jobs big-data comsol data-science deep-learning environment-modules more...
Richard Le	student facilitator	bash c++ compiling debugging pip programming-best-practices python software-installation	ai big-data deep-learning image-processing machine-learning natural-language-processing
Shawn Sivy	rcf cise	acls backup bash batch-jobs cifs compiling containers cuda more...	administering-hpc amber ansible astrophysics authentication backup bash biology more...
Ying-Chih Sun	student facilitator	ai archiving backup big-data data-analysis data-management data-sharing file-formats more...	ai big-data data-analysis data-management data-management-software linear-programming machine-learning mathematica more...
Tejasvi Munge	student facilitator	anaconda data-analysis java jupyterhub matlab pip putty python more...	biology c data-analysis data-wrangling deep-learning image-processing java machine-learning more...
Yun Shen	mentor	big-data bioinformatics data-analysis data-science genomics open-ondemand Programming programming more...

Projects

Project Title	Project Institution	Project Owner	Tags	Status
Deep convolutional neural networks (dCNN) for image segmentation, instance labeling, and tracking.	University of Delaware	Anita Schwartz	bash, bioinformatics, computational-chemistry, debugging, machine-learning, programming, python, scripting, slurm, software-installation, tensorflow	Complete
Project WiCCED ML	University of Delaware	Anita Schwartz	docker, hadoop, jupyterhub, kubernetes, machine-learning, programming-best-practices, python, r, software-installation, spark, tensorflow, tuning	Complete

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Knowledge Base Resources

Title	Category	Tags	Skill Level
A guide to pip in Python	Learning	pip, software-installation	Beginner, Intermediate
Installing Rocky Linux Operating System	Learning	unix-environment, software-installation	Beginner
Neurodesk	Website	psychology, containers, software-installation, version-control	Beginner, Intermediate, Advanced